Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3008 |
Symbol | |
ID | 5373314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3604555 |
End bp | 3605676 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640831250 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001367202 |
Protein GI | 153001521 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00899057 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AGAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG CGCATTATTT GCGGACATGG GAGAGAAACC CTTTCGTGCC GATCAGCTCA TGAAATGGCT ATATCATTTC GGTGTCAGTG ACTTCGAAGA GATGACCAAC ATCAACAAAG TGTTACGTCA AAAATTGGCG GCACGCTGCG AGATCGTTGC GCCGGAAATT TCGAGCTTCC AAAAATCGAC CGATGGGACG ATTAAATTCG CGATCAACGT TGGTCAAGGC CAAGAAGTGG AAACGGTTTA TATTCCCGAG GATGACCGCG CGACCTTGTG CGTTTCATCC CAAGTGGGTT GTGCCCTCGA ATGTACTTTC TGCTCTACGG GTCAGCAAGG GTTTAACCGT AACTTAACGG TTTCTGAAAT CGTCGGCCAA ATTTGGCGTG TATCGCACTT TTTAGGTTTT GCTAAAGACA CGGGCGAGCG TCCGATCACT AACGTCGTGA TGATGGGCAT GGGCGAGCCA TTGCTTAACC TAGCCAATGT GATCCCTGCG ATGGACATCA TGCTCGATGA TTTTGGTTTT AGCTTATCAA AACGCCGCGT GACCTTATCA ACATCGGGCG TAGTGCCAGC GTTAGATAAA TTGGGTGATG CGCTTGATGT GGCACTGGCT GTGAGTATCC ATGCGCCAAA TGATGAGCTA CGTGACATTC TGGTCCCAAT CAATAAAAAA TATCCGCTGG ATGAGTTTTT AGCGGGTATT CGTCGTTATA TCGCTAAATC TAATGCAAAC CGTGGCCGCG TGACGGTTGA ATACGTGATG CTAGATCACA TCAACGACAG CACAGATCAA GCCCATGAGT TAGCTAAGTT GATGAAAGAT ACACCTTGTA AGATAAATCT GATCCCATTT AACCCGTATC CAGGCTCGCC TTACGGCCGT TCATCTAACT CACGTATCGA CCGTTTTTCT AAGGTGCTAA TGGAGTACGG TTTTACTGTG ATCGTGCGTA AAACCCGTGG CGATGATATT GATGCTGCTT GTGGTCAGTT AGCTGGTGAT ATTCGCGATA GAACAAAACG TTTAGCAAAA AAACGCATGC AAGAAAACCA GATTTCAGTC ACAATGAATT AA
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Protein sequence | MSEKKINLLD LDRKAMRALF ADMGEKPFRA DQLMKWLYHF GVSDFEEMTN INKVLRQKLA ARCEIVAPEI SSFQKSTDGT IKFAINVGQG QEVETVYIPE DDRATLCVSS QVGCALECTF CSTGQQGFNR NLTVSEIVGQ IWRVSHFLGF AKDTGERPIT NVVMMGMGEP LLNLANVIPA MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPINKK YPLDEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTDQ AHELAKLMKD TPCKINLIPF NPYPGSPYGR SSNSRIDRFS KVLMEYGFTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK KRMQENQISV TMN
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