Gene Shew185_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3008 
Symbol 
ID5373314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3604555 
End bp3605676 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content46% 
IMG OID640831250 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_001367202 
Protein GI153001521 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00899057 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AGAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG CGCATTATTT 
GCGGACATGG GAGAGAAACC CTTTCGTGCC GATCAGCTCA TGAAATGGCT ATATCATTTC
GGTGTCAGTG ACTTCGAAGA GATGACCAAC ATCAACAAAG TGTTACGTCA AAAATTGGCG
GCACGCTGCG AGATCGTTGC GCCGGAAATT TCGAGCTTCC AAAAATCGAC CGATGGGACG
ATTAAATTCG CGATCAACGT TGGTCAAGGC CAAGAAGTGG AAACGGTTTA TATTCCCGAG
GATGACCGCG CGACCTTGTG CGTTTCATCC CAAGTGGGTT GTGCCCTCGA ATGTACTTTC
TGCTCTACGG GTCAGCAAGG GTTTAACCGT AACTTAACGG TTTCTGAAAT CGTCGGCCAA
ATTTGGCGTG TATCGCACTT TTTAGGTTTT GCTAAAGACA CGGGCGAGCG TCCGATCACT
AACGTCGTGA TGATGGGCAT GGGCGAGCCA TTGCTTAACC TAGCCAATGT GATCCCTGCG
ATGGACATCA TGCTCGATGA TTTTGGTTTT AGCTTATCAA AACGCCGCGT GACCTTATCA
ACATCGGGCG TAGTGCCAGC GTTAGATAAA TTGGGTGATG CGCTTGATGT GGCACTGGCT
GTGAGTATCC ATGCGCCAAA TGATGAGCTA CGTGACATTC TGGTCCCAAT CAATAAAAAA
TATCCGCTGG ATGAGTTTTT AGCGGGTATT CGTCGTTATA TCGCTAAATC TAATGCAAAC
CGTGGCCGCG TGACGGTTGA ATACGTGATG CTAGATCACA TCAACGACAG CACAGATCAA
GCCCATGAGT TAGCTAAGTT GATGAAAGAT ACACCTTGTA AGATAAATCT GATCCCATTT
AACCCGTATC CAGGCTCGCC TTACGGCCGT TCATCTAACT CACGTATCGA CCGTTTTTCT
AAGGTGCTAA TGGAGTACGG TTTTACTGTG ATCGTGCGTA AAACCCGTGG CGATGATATT
GATGCTGCTT GTGGTCAGTT AGCTGGTGAT ATTCGCGATA GAACAAAACG TTTAGCAAAA
AAACGCATGC AAGAAAACCA GATTTCAGTC ACAATGAATT AA
 
Protein sequence
MSEKKINLLD LDRKAMRALF ADMGEKPFRA DQLMKWLYHF GVSDFEEMTN INKVLRQKLA 
ARCEIVAPEI SSFQKSTDGT IKFAINVGQG QEVETVYIPE DDRATLCVSS QVGCALECTF
CSTGQQGFNR NLTVSEIVGQ IWRVSHFLGF AKDTGERPIT NVVMMGMGEP LLNLANVIPA
MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPINKK
YPLDEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTDQ AHELAKLMKD TPCKINLIPF
NPYPGSPYGR SSNSRIDRFS KVLMEYGFTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK
KRMQENQISV TMN