Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3007 |
Symbol | |
ID | 5373313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3603734 |
End bp | 3604522 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831249 |
Product | type IV pilus biogenesis/stability protein PilW |
Protein accession | YP_001367201 |
Protein GI | 153001520 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000355185 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCATG GATTGCCAAG GTTTTCGTTG ATTTTAACCC TGTCATTATT GATGACAGGG TGCGTCACTG AGCGTACTTA TACTGGGACA GATATTCCTG TTTCGGAACG AAAGTTAGAC AAAGTCGCCG CCGCGCGCGA GCGTTTGCAG CTCGGCTTAA CCTATTTAAA TCGAGGTAAC TCGGAACAAG CCAAATACAA TCTTGATAAA GCATTAGAAT ATGCTCCAGA GCTCGAAGAT GTGCATACTG CTTTGGCTTA TTACTATCAA ACCGTGGGCG ATCTAGTACG TACCGAAGAG TCGTACATGA ATGCCATTAG TACCAAGGAC GCCTCTGGCG ATTCCATGAA TAATTTCGGG GTGTTTTTGT GTCAACAAAA GCAATACGAC AAAGCTGAAA AAATGTTTTT GGCCGCAATC GAGATGCCTA AATATACGCG AACGGCCTCA AGCTACGAGA ACTTAGGTCT CTGTAGCCGT GAAGCAGGAC AAGCAGAAAA GGCACGACAG TATTTTCAGA TGGCGTTAAA GTATGACCCG AGAAGATCGG TGTCGTTGCT GGAGATGGCA GAGTTAGAAG TCGACCAAGG TGATTTTATT CAGGCGCGAA ACCAATTAGC GCGATATCAC CAAGTGGCTG AGCAAACTCC AGAAAGTTTA GCGCTCGGAA TCAAAATAGA GCAGGCAGTG AATGATGATG CCGCTGTGAA GAGATTTGGT ATTTTATTGC TTGCCAAATT CCCAGCATCA CCTCAGGCCA AGCAATACAG AGTTAATTTG CATCAATGA
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Protein sequence | MKHGLPRFSL ILTLSLLMTG CVTERTYTGT DIPVSERKLD KVAAARERLQ LGLTYLNRGN SEQAKYNLDK ALEYAPELED VHTALAYYYQ TVGDLVRTEE SYMNAISTKD ASGDSMNNFG VFLCQQKQYD KAEKMFLAAI EMPKYTRTAS SYENLGLCSR EAGQAEKARQ YFQMALKYDP RRSVSLLEMA ELEVDQGDFI QARNQLARYH QVAEQTPESL ALGIKIEQAV NDDAAVKRFG ILLLAKFPAS PQAKQYRVNL HQ
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