| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3005 |
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| Symbol | ispG |
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| ID | 5373016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3601503 |
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| End bp | 3602618 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831247 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001367199 |
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| Protein GI | 153001518 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00360667 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAATG AAACTCCCAT AAAAAGACGT CCTTCCACCC GCATCTATGT GGGTAATGTA
CCGATTGGTG ATGGGGCGCC GATTGCCGTT CAGTCAATGA CCAATACTAA GACCACAGAC
GTTGAAGCGA CTATCGCTCA AATTCGTGCC TTAGAAAAAG TCGGTGCCGA CATAGTACGT
GTCTCAGTAC CGACTATGGA TGCGGCTGAA GCTTTTAAAC TCATTAAGCA AGCGGTCAAC
GTGCCTTTAG TGGCCGACAT CCATTTCGAT TATCGCATTG CCTTAAAAGT TGCTGAGTAT
GGTGTCGATT GCCTGCGTAT TAATCCGGGC AATATTGGCA ATGAAGAGCG TATTCGCAGC
GTGGTTGAAT GCGCCCGTGA CCACAATATT CCCATCCGTA TTGGGGTGAA TGGCGGTTCA
TTAGAGAAAG ATCTGATGGA CAAGTACAAA GAGCCCACGC CACAAGCATT GCTCGAATCA
GCCATGCGCC ATGTGGATAT TCTTGATAGA TTGAACTTCG ACCAATTCAA GGTCAGCGTG
AAAGCCTCCG ACGTGTTTTT AGCGGTTGAA TCCTATCGTT TATTGGCAAA GCAAATTCGT
CAGCCTTTGC ATTTGGGTAT TACCGAAGCG GGCGGCGCAC GCGCAGGTTC TGTTAAATCG
GCAGTGGGTT TAGGCATGTT ATTGGCCGAA GGCATAGGTG ATACCCTGCG TATTTCCCTA
GCCGCCGATC CTGTCGAAGA AATTAAAGTC GGTTTTGACA TTTTAAAATC GCTGCGTATC
CGTAGCCGCG GGATTAACTT CATCGCCTGC CCATCTTGCT CCCGTCAAGA GTTTGATGTG
ATAAGCACAG TCAATGAGTT AGAACGTCGC CTCGAAGACG TGACTACCGC CATGGATGTG
TCTATTATCG GCTGCGTAGT GAACGGTCCT GGCGAAGCCT TAGTGTCGCA TATCGGTTTA
ACCGGCGGAC ACAATAAGAG CGGATATTAC GACGAGGGCG AACGTCAAAA AGAACGTTTT
GATAACGACA ATATTGTCGA TTCCCTCGAA GCGAAAATTC GCGCTAAGGC CAGTCAAATG
GCGAACCGGA TTCAAATAAA AGACACAACT GAGTAA
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| Protein sequence | MYNETPIKRR PSTRIYVGNV PIGDGAPIAV QSMTNTKTTD VEATIAQIRA LEKVGADIVR
VSVPTMDAAE AFKLIKQAVN VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRS
VVECARDHNI PIRIGVNGGS LEKDLMDKYK EPTPQALLES AMRHVDILDR LNFDQFKVSV
KASDVFLAVE SYRLLAKQIR QPLHLGITEA GGARAGSVKS AVGLGMLLAE GIGDTLRISL
AADPVEEIKV GFDILKSLRI RSRGINFIAC PSCSRQEFDV ISTVNELERR LEDVTTAMDV
SIIGCVVNGP GEALVSHIGL TGGHNKSGYY DEGERQKERF DNDNIVDSLE AKIRAKASQM
ANRIQIKDTT E
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