Gene Shew185_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3003 
Symbol 
ID5373006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3599432 
End bp3600052 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content46% 
IMG OID640831245 
Producthypothetical protein 
Protein accessionYP_001367197 
Protein GI153001516 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0205779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAATTT ATAGCACAGA AGAACAACAA GTTGATGCTA TCAAGCAGTT CTGGAAAGAC 
TATGGAACCT CGATTTTTAT TGGGGCGTTC GTTGGTTTAG GCGGCCTGTA TGCGTGGAAT 
TATTATTCTG ACGTTAAAGT GGCCCAAGCG GAAGAAGCCT CAAAAGCCTT CCACCAGTTG 
ACCACTAATT CAGCCGATGA AACTGCAATG CTTGCGGGCG TCGCCGAGTT TTCTAAAAGT 
CATGATCAAA AGGGCTATCA AGCGCTGTTA GAACTGATCG TGGCAAAAAC GGCGGTAGAA 
GCCAAGGATT ACCCTAAAGC AATCGAAGCC TTGAACAAGG TTATCGCGGC TAAGCCAGGT 
GCTGGTTTAG ATGTGATTGC CACTTTACGT GTAGCCCGAA TCCAAGCTGA ACAAGGTCAA 
ATTGACGCCG CTCTGGCGAC CTTAGAACAA GTCACAGATA AAGCCTTCTT CGCCCAGCGC 
GATGAATTAA AAGGTGATTT CTTAGTACGT CAAGGTGAAG TTGAGAAAGC GAAAACAGCT 
TATCAAGCTG CCATGGACAA TGGTGGTGTG GTGACAAGCC CAGCGCTTAA AATCAAACTT 
GATAGCCTAA ATCAGGCATA A
 
Protein sequence
MEIYSTEEQQ VDAIKQFWKD YGTSIFIGAF VGLGGLYAWN YYSDVKVAQA EEASKAFHQL 
TTNSADETAM LAGVAEFSKS HDQKGYQALL ELIVAKTAVE AKDYPKAIEA LNKVIAAKPG 
AGLDVIATLR VARIQAEQGQ IDAALATLEQ VTDKAFFAQR DELKGDFLVR QGEVEKAKTA 
YQAAMDNGGV VTSPALKIKL DSLNQA