| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2995 |
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| Symbol | |
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| ID | 5372636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3585200 |
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| End bp | 3586630 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831237 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001367189 |
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| Protein GI | 153001508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.049065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGAT TCCTGTTCGC TCTTATCTTA GGTTTCTTAC TGACTGCCTG TCAGCAGGTG
ACCGTGGACG AAACAGAATT CGTGCCGAAA AAATTAACTG AGTTAAGAGT CGGCACACTC
TACGGCCCAC AGATTTATAT GACATCGGGC CAAGGTGATA GCGGTTTCGA TTACGATATG
GCGGTATTGT TCGCCGAATA CTTAGATGTG CCCTTAAAAA TGGTGCCCTA CACTAACCGC
ACCGAGCTGT ACGAAGCCCT TAAAAAGAAT GAAATCGACC TGATTGCCGC GGGCATGACA
GAAACACCCG CAAGGCGTGA ACAGTTCCGC CTAGGGCCGC CGTTGTACCG CGTTAATCAA
GTATTGGTGT ATCGCGAAGG CATGCCAGCG CCCAAAGACA TCAGCGACTT AAAAGGTAAG
ATCACTGTCA TCGCCGACTC TTCCTTTGTC GAGACATTAA CTCAATTGCA AAAGCATTAT
CCAACGCTGG TGTGGGATCA AATTACCGAC AAAGACAGCG AAGAATTGCT GGCCATGATC
GCGAATAAAG AAATTGACTA CACTATCGCC GACTCCAGCA GCGTACAAAT CAACCGCCGC
TACTTGCCCG ATCTGCGTTC AGGCCCCGTA CTTGAAGAAA AGCTCGATGT GGTCTGGCTG
TTACCGCCGA CCCGCAGTGA TGAACTCATG AGCCAATTAC TGGCCTTTTG GCACCAAGAA
AAACTGGCTG GCACGCTCGA TCATCTCAAC GAGAAATACT TTGGCCATGT GAAACGCTTC
GATTATGTCG ATACTCGGGC ATTTATCCGC GCTATCGAAA CCGTCTTGCC CCGCTATCGT
CAGCTATTTG AAACCCATGC GGGCAATTTA GATTGGCGTA AGCTTGCGGC GACTAGCTAT
CAAGAGTCCC ATTGGAATCC CCATGCCCGC TCGGCAACGG GGGTACGCGG CATGATGATG
TTGACTCAGC CTACGGCAAA AGAAATTGGC ATCACCAACC GTTTGGATGC GGAAGAAAGT
ATCCGTGGCG GCGCGGCCTA TTTGAACGAT ATGATCAATC GTCTGCCAGA ATCCATTCCC
GAGAGTCAAC GTATGTGGTT TGCACTGGCG TCCTACAACA TAGGGTATGC CCATGTTGAA
GATGCGCGAA AGCTGGCTGA ATCGATGGAA TTAAATCCCA ATGCGTGGCG AGATTTAAAG
AAAGTGCTGC CACTGCTGCA AAAACGTAAG TACTATCAAA AAACCCGCTA CGGCTATGCC
CGTGGCAGTG AAGCCGTCCA TTACGTCGAC AGTATTCGCC GCTACTACGA CACATTAGTC
TGGGTGGATA ATCAGTCGAA ACAGCAAAAC CCCGAAGAAG AACCGAGCGA TCTTGCGTCG
GAAGAACCCG CCATTCCCGC TGGAACATTA AGCCCAGAAC AACCTAAGTA A
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| Protein sequence | MTRFLFALIL GFLLTACQQV TVDETEFVPK KLTELRVGTL YGPQIYMTSG QGDSGFDYDM
AVLFAEYLDV PLKMVPYTNR TELYEALKKN EIDLIAAGMT ETPARREQFR LGPPLYRVNQ
VLVYREGMPA PKDISDLKGK ITVIADSSFV ETLTQLQKHY PTLVWDQITD KDSEELLAMI
ANKEIDYTIA DSSSVQINRR YLPDLRSGPV LEEKLDVVWL LPPTRSDELM SQLLAFWHQE
KLAGTLDHLN EKYFGHVKRF DYVDTRAFIR AIETVLPRYR QLFETHAGNL DWRKLAATSY
QESHWNPHAR SATGVRGMMM LTQPTAKEIG ITNRLDAEES IRGGAAYLND MINRLPESIP
ESQRMWFALA SYNIGYAHVE DARKLAESME LNPNAWRDLK KVLPLLQKRK YYQKTRYGYA
RGSEAVHYVD SIRRYYDTLV WVDNQSKQQN PEEEPSDLAS EEPAIPAGTL SPEQPK
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