| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2987 |
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| Symbol | |
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| ID | 5371578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3569972 |
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| End bp | 3571078 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640831229 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001367181 |
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| Protein GI | 153001500 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.331807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGAA CTGCCCGACG TTCTTGGCGC ACTATCAGCG TCTGTGTGTT TGCTTTAGTC
ACAGTATCCG CCTGTCAAAA GGAAGTCACT GAACACGCCA CTACAGCCGT ACTGCCCTCA
GTCACAAGCC AAGCGTTGAG CCTGACCCCA AGCTATCAGC ACGAGCAGAC CTTCACGGGG
ACTATCCGTG CGGGCAACAC GACTGGCGTC GGCTTTGAAC TAGCAGGAAA GTTAAACGAG
CTACAGGCCG ATTCCGGCAT CAAAGTGAAG CAAGGTCAAA TACTGGCAAT CCTCGATACC
CGACTACTTG AAGCCGAGCG TCAAGAGATC CAAGCGAGTC TGGCGCAAAC CCAAGCCGAT
GTTGATCTGG CCACCAGCAC TCTAAAACGT AATCAAGAAT TGAAAAAATC TGGCTATGTC
TCTGAGCAGC TATTAGATGA AAACCGCTCA CAATTAAATA GCTTAGCCGC GGCGAAAAAC
CGCCTACTTG CCTCACAGCA TGCCAATCAA CTTAAGCTCG ATAAATCCAT CTTAGTGGCG
CCTTTCGACG GCACCATCAG CCAAAGACTG CATAACTTGG GCGAAGTGGT TGCTGCGGGT
AACCCCATTT TCACCTTAGT GGGCAATATC AATCCTGAAG CCTACATTGG CGTACCTGTC
GCGTTAGCGG AGCAGTTTCA CGCCGGACAG CAAGTACAAG TCAGCGTGCA AGACCAAACC
TTTACCGCCG AAATTGCCGG TATCAGCGCC GAAGTGAATC CCGTCAGTCG CACCCTACAA
CTTAGGATCA GCCTGCCCCA AGATGCCCGT GTGATTAACG GTGAAATTGC GTATCTACAT
CAACAGCAGC AAATTGAGCA AGCTGGGTAT TGGGTGCCAA TTTCAGCGCT AACGGATGGC
ATTCGCGGAT TATGGAATCT GTATGTCATC GCAAATCATG AACAGCAATC CATCATAGAG
CGCCGAGATG TAGAAATCCT CTACACCACC CAAGACATGG CCTACATTCA AGGCGCGATT
CAGCCCAATG AAATCTATGT CAGCCAAGGA CTCCATAAGC TGGTCGTAGG CCAAGCCGTG
TCTCCCATTG CCGCAGCCAC GAGGTAG
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| Protein sequence | MDRTARRSWR TISVCVFALV TVSACQKEVT EHATTAVLPS VTSQALSLTP SYQHEQTFTG
TIRAGNTTGV GFELAGKLNE LQADSGIKVK QGQILAILDT RLLEAERQEI QASLAQTQAD
VDLATSTLKR NQELKKSGYV SEQLLDENRS QLNSLAAAKN RLLASQHANQ LKLDKSILVA
PFDGTISQRL HNLGEVVAAG NPIFTLVGNI NPEAYIGVPV ALAEQFHAGQ QVQVSVQDQT
FTAEIAGISA EVNPVSRTLQ LRISLPQDAR VINGEIAYLH QQQQIEQAGY WVPISALTDG
IRGLWNLYVI ANHEQQSIIE RRDVEILYTT QDMAYIQGAI QPNEIYVSQG LHKLVVGQAV
SPIAAATR
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