| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2982 |
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| Symbol | |
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| ID | 5371368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3565498 |
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| End bp | 3566550 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640831224 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001367176 |
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| Protein GI | 153001495 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0566081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG GTTGGAAAAA GTCAGTAATT AAGCCTAGCG ACACAATATT GAGGGCTATT
GAGATATTGA ACAATGAAGT ACTCAAAGTC GTATTGGTCG TTAATGATTC TGGCTGTTTG
CGTGGCACGA TAACAGATGG GGATATCAGA CGAGGTATTT TGCGAGGCGT CTCTTTACAG
TCTTCTGTAG AGGAGATCAT GTTTGTTAAT CCCGTTACCG CAATCAATGG GACACCTAAA
CGTGAACTCG CTAAAATCAT GGATCAAAAA TCGATCACAT CGATACCTAT CCTTGATAAT
GGCAAAGTCA TAGATGTTCA AACGTTAAAA TCAGTCTCAA AGAAAAATGT GTATGATAAT
CCAGTTTTTT TAATGGCAGG GGGATTTGGT ACACGATTAA GGCCGCTGAC CGACCATGCC
CCAAAGCCAA TGTTGAGTGT TGGTGGTCGT CCTATACTAG AGACCATTTT GTTAAGTTTT
ATTCGGGTTG GGTTTAAAAA TTTCTATATT TCGGTTTTCT ACAAACCAGA GATTATTAAA
TGTTACTTTG GTGATGGAAG CAAATGGGGC GTTAGCATTC AGTATGTTCA GGAAGATCAG
CCACTAGGTA CTGCTGGTGC TCTAAGTCTA TTGCCTCGAG ATATGCCGAG TTTACCCATG
ATTATGATGA ATGGGGATAT CCTCACCAAT GTTGATTTTG AAAGATTAAT CGAATTCCAT
AATGATAATG GCGCGACGGC AACTATGTGC GTGCGAGATT ATGAATACCA AGTTCCTTAT
GGTGTCATTG TTGGCGATGG TCATCATATT TTGTCGATGG AAGAGAAGCC TATTCAACGT
TTCTTTGTGA ACGCAGGCAT TTATGTATTA ACGCCAGAAT TGATTCGAGA AGTACGGCAA
GACATTAAAA TCGATATGCC AACGTTATTA CAAAATACGA TTGATAAAAT GGAACAAGTG
CTCATGTTTC CCATCCATGA GTATTGGTTG GATATCGGCC GTTTAGATGA TTTTGACCGT
GCTCAAGCCG ATATTGCCAT GCTAGAGATT TAA
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| Protein sequence | MNNGWKKSVI KPSDTILRAI EILNNEVLKV VLVVNDSGCL RGTITDGDIR RGILRGVSLQ
SSVEEIMFVN PVTAINGTPK RELAKIMDQK SITSIPILDN GKVIDVQTLK SVSKKNVYDN
PVFLMAGGFG TRLRPLTDHA PKPMLSVGGR PILETILLSF IRVGFKNFYI SVFYKPEIIK
CYFGDGSKWG VSIQYVQEDQ PLGTAGALSL LPRDMPSLPM IMMNGDILTN VDFERLIEFH
NDNGATATMC VRDYEYQVPY GVIVGDGHHI LSMEEKPIQR FFVNAGIYVL TPELIREVRQ
DIKIDMPTLL QNTIDKMEQV LMFPIHEYWL DIGRLDDFDR AQADIAMLEI
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