Gene Shew185_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2971 
Symbol 
ID5370314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3553648 
End bp3554955 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content42% 
IMG OID640831213 
Producthypothetical protein 
Protein accessionYP_001367165 
Protein GI153001484 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC TGTTCACATC AAACATTGCC ATTATCGAAC GTCGCTGGCC TATCGTCGCG 
GCAACAATTA AAAGCCAATC TATCAACCAC CTAGATTCGC ACCTAGTTCA AGGCCAAAAC
CAAACAATTA GCGTTAATGG TATTCAATTG AGCAGTCGCC ATGACCGTAT GGCAGAAGTG
AATCTCAATA TTGATCAGTT ACCTTCTCAT AGTCATATCG TTCATTTGTA TGGCTTAGGC
TTAGGCGATT TACCTCGAGA ACTCTTACTT AGCTACCCGC TAGAAAAACT GAATGTAACC
TTGCTTAATG TGGCGATCAC TCAATTAGTG CTCAGCTATA CCGATCAAAC CGATTGGTTA
TCCAATCCTA AATGCGAATT GCATCTCGCC ACACCAGAAA GTACATTAAT CTTACCTTTC
ATTACCTCTT CAGCGGAATT GGTGTTAGCC GATGATGATG GTGCAGTGTT AAGAAATAAA
ATATTAATCC ACTACCAGAC TCTCTTTGCG GCAAGATCAC ATCAAACCCA AGACCCTCAA
ATTCTGGCGC GCTTTCAGCA AAATACAGCG CTAGTACAGC AAGACGATGA TGTTTCCGAG
CTTTACCTTG TACCTCGACA GCAAGTCATC GTAGTCGGTG CTGGCCCTTC TTTAGAGGCG
GCGCTATCTC AGCTTGAGTG TATTTCTAAG CGTAAAAATC GGCCACTTAT CATTGCCGTT
GATACGGCAT TAAAACCTTT ATTACAAAAT GGTATTAGAC CGAATATAGT AGTGAGTATC
GATGCAGATA TTAATGAGAC ACATCTGTTG CCAACTCAAT CGGCGGGGAT CAATTTAGTC
TATTTTCCAA GATTGTCATC AGAGGTACTA ATACGTTGGC AGGGAAAGCG ATTTGTAGCC
TATGGCAAAC ACGCCTTATA TGACAGTCTG CGAGCGATTA AGCATCATGA TACTCTTTAT
ACTGGAGGCA GTGTGCTTCA CCCAGCAGTT GACCTAGCAG TAAAAATGCA AGCAAAAGAA
GTGTTTTTAA TTGGCTGTGA TTTGAGTTTT CCCAATAATA AAACCCATAC ATGTTGGGCC
GATGGCGAAC TTAATATGCA CATTGCATCG CAAGCATCGC ACCAATGGGT GTTAAATAAC
CAAGGCAAAA AGGTAACTAC CAGCCTTAGT TTCATTAGCT ATATCGATGC CCTCGAAGCT
TATATTAGAG TTCATCCCAA CACCGTTTTT CACACGACCA GTACACTCGG CGCCAAAATT
AAGGGGTGCC AACATATGGA CATTAAAAAC TTAAGGTCAA AGTTATGA
 
Protein sequence
MTDLFTSNIA IIERRWPIVA ATIKSQSINH LDSHLVQGQN QTISVNGIQL SSRHDRMAEV 
NLNIDQLPSH SHIVHLYGLG LGDLPRELLL SYPLEKLNVT LLNVAITQLV LSYTDQTDWL
SNPKCELHLA TPESTLILPF ITSSAELVLA DDDGAVLRNK ILIHYQTLFA ARSHQTQDPQ
ILARFQQNTA LVQQDDDVSE LYLVPRQQVI VVGAGPSLEA ALSQLECISK RKNRPLIIAV
DTALKPLLQN GIRPNIVVSI DADINETHLL PTQSAGINLV YFPRLSSEVL IRWQGKRFVA
YGKHALYDSL RAIKHHDTLY TGGSVLHPAV DLAVKMQAKE VFLIGCDLSF PNNKTHTCWA
DGELNMHIAS QASHQWVLNN QGKKVTTSLS FISYIDALEA YIRVHPNTVF HTTSTLGAKI
KGCQHMDIKN LRSKL