Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2958 |
Symbol | flgF |
ID | 5371905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3543079 |
End bp | 3543822 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831199 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_001367152 |
Protein GI | 153001471 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACAAAT TCCTTTATGT CGCCATGAGT GGTGCCAAGC AAAATATGAA TGAGCTGGCG CTCCGTGCGA ATAACTTAGC CAACGCGAAT ACCGACGGTT TTAAATCCGA TATGGCGCAA GCTCGCTCGA TGCAGGCCTT CGGTGAAGGA TTGCCGACAA GGGTGTTTGC GATGACAGAA TCTCCGTCAG CAAATTTTCG CTCAGGTCCA ATAAAAACGA CTGGACGGGA TCTCGATGTT GCCATTAAAG GCGACGGCTG GTTTGCCGTG CAGGCAAAAG ATGGCAGTGA AGCCTATACC CGCGCTGGCA GTTTAAGTTT TGACTCCACT GGTTTATTAC ACAATGACAG GGGAAATCCT GTTATGGGTG ATGCCGGTCC CATAGTGTTG CCACTTCCTA TCGAGAAAGT TTCAATTTCT CAGGATGGCA TTATTTCTGT GCGACCTCAG GGCGCTACTG CTGAAGTGGT GGAAGAAGTC GGTCGCTTGA AACTCGTTAA TCCGGGGAAT GCCGAGATGA TGCGCGGTGA GGATGGATTG TTCCGGCTCG TGTCTGGCAA TATCGCTCCT GCCGATCCTA GCGTAGGGGT TGAAAGTGGC GCAGTGGAAG GCAGTAACGT AAACCCTGTC GATGAAATGG TGTCTTTGAT TGACCTTCAG CGTCAGTTTG AATTGCAAGT CAAGATGATG AAAACCGCGG AAGAAAATGA TCGCGCTTCA TCTTCATTAA TGCGTATTAG TTAG
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Protein sequence | MDKFLYVAMS GAKQNMNELA LRANNLANAN TDGFKSDMAQ ARSMQAFGEG LPTRVFAMTE SPSANFRSGP IKTTGRDLDV AIKGDGWFAV QAKDGSEAYT RAGSLSFDST GLLHNDRGNP VMGDAGPIVL PLPIEKVSIS QDGIISVRPQ GATAEVVEEV GRLKLVNPGN AEMMRGEDGL FRLVSGNIAP ADPSVGVESG AVEGSNVNPV DEMVSLIDLQ RQFELQVKMM KTAEENDRAS SSLMRIS
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