Gene Shew185_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2952 
SymbolflgL 
ID5373625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3536142 
End bp3537353 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content44% 
IMG OID640831193 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_001367146 
Protein GI153001465 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAT CATCCGCGCA GCTCTTTAAT CAAAGCATTA CCAGTGTGCT GCAAAAGCAA 
ACAGCGACCA GCAAAATTCT TGACCAATTG AGCAGTGGTA AGAAAGTCAA TACTGCGGGT
GACGATCCTG TGGCGTCACA GGGTATCGAT AATCTGAATC AAAAAAATGC ACTCGTCGAT
CAGTTTATGA AGAACATTGA TTATGCAACG AATCGTCTTG CCGTGACTGA AAGTAAACTC
GGTAGTGCTG AAGATTTGAC CGGTTCGATG CGTGAGCAAG TTATGCGCGC GATAAACGGC
ACACTATCTG GAACTGAGCG GCAAATGATT GCCGATGAGA TGAAAGGCAG CTTGGAAGAG
TTGCTTTCTA TTGCGAATAG TAAGGATGAA TCTGGCAATT ATATGTTCTC CGGTTTCAGT
ACCGATAAAG AACCTTTTGC TTTTGATAAT TCGACGCCGC CTAAAATTGT GTATAGCGGT
GATTCTGGCG TCAGAAATAG TTTAGTGCAA ACGGGTGTTG CCATGGGGAC AAACATCCCT
GGCGATAGCG CGTTTATGAA AGCACCCAAT GGACTTGGTG ATTATAGCGT CAATTATTTG
GCCAGCCAGC AGGGTGAGTT TAGCGTTAAA ACGGCGAAAA TTGCTGACGC TGCAACTTAT
GTGGCTGATA CATATACGTT TAACTTTACT GATAATGGCG CTGGTGGCAC GAATTTACAA
GTGCTCGATT CTGCCAATAA TCCTGTCGCA AACGTCGCTA ATTTTGATGC GACCAATCCC
GTTAGTTTTA ATGGTATAGA CGTTAAAATT GATGGAAAAC CCGGCGCTGG CGATAGTTTC
ACCATGGAAC CCCAGGCCGA GGTCAGTATT TTCGATACGA TCAGCAGTGC GATTGCATTA
ATCGAAGACC CTAATTCTGC CAACACGCCT CAAGGGCGAG CTCAGTTGGC ACAGATATTG
AATAACGTTG ATAGTGGCGT CAATCAAATT AGTTCTGCCA GAAGTGTGGC GGGGAATAAT
CTGAAAGTTG TCGAAAGTTA CACAGAGACA CATACCGAGG AGAAAGTGGT TAACACATCA
GCGCTATCAC TCTTGGAAGA TCTCGATTAT GCATCAGCGA TTACGGAATT TGAAAAGCAA
CAGCTTGCAT TGAACGCAGT CTCTAACGTT TTTAGTAAGG TGGGTTCTGT TTCCCTGTTC
GACTTTATTT AA
 
Protein sequence
MRLSSAQLFN QSITSVLQKQ TATSKILDQL SSGKKVNTAG DDPVASQGID NLNQKNALVD 
QFMKNIDYAT NRLAVTESKL GSAEDLTGSM REQVMRAING TLSGTERQMI ADEMKGSLEE
LLSIANSKDE SGNYMFSGFS TDKEPFAFDN STPPKIVYSG DSGVRNSLVQ TGVAMGTNIP
GDSAFMKAPN GLGDYSVNYL ASQQGEFSVK TAKIADAATY VADTYTFNFT DNGAGGTNLQ
VLDSANNPVA NVANFDATNP VSFNGIDVKI DGKPGAGDSF TMEPQAEVSI FDTISSAIAL
IEDPNSANTP QGRAQLAQIL NNVDSGVNQI SSARSVAGNN LKVVESYTET HTEEKVVNTS
ALSLLEDLDY ASAITEFEKQ QLALNAVSNV FSKVGSVSLF DFI