Gene Shew185_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2948 
Symbol 
ID5372190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3531834 
End bp3532649 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID640831190 
Productflagellin domain-containing protein 
Protein accessionYP_001367143 
Protein GI153001462 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA CAGTTAATAC CAACGTGACT TCGATGAAGG CGCAAAAGAA CTTAAACGCT 
TCAGGCAATG CATTGGCAAC GTCTATGGAA CGTCTTTCCA GTGGTTTGCG TATTAACAGC
GCAAAAGATG ATGCAGCAGG GTTAGCAATT TCTAACCGTT TGAACTCTCA GGTTCGTGGC
TTAGATGTTG GCATGCGTAA TGCCAACGAC GGTATTTCAG TGGCGCAAAT CGCAGAAGGT
GCGATGCAAG AGCAAACAAA CATGCTGCAA CGTATGCGTG ATTTGAGTGT TCAGGCGGTT
AACGGTGCAA ACTCTACCAG TGATAAAGAT GCCATTCAAG CCGAGATAGA TCAGTTGGCT
CTTGAAATTA CAGCGATTTC CAACACTACA GCATTTGGTG ATACTAAGTT GTTGAGTGGA
GGTTTTACTG CAAAAAATTT CCAAGTAGGT CATCAAGAAG GTGAAAATAT TTCCATCTCT
ATTTCTGGTA CCGATGCTTC TACTTTAGGG GTTGAGGGGC TGCTTGTGTC CTCTGATGGA
GCCGCGTCAA CGTCAATAGG TTTAATCGAT ACAGCAATCA AAACTATTGA TACGCAACGT
GCGAAGCTAG GGGCAACACA AAATCGTTTA AGTCATAACA TTAGCAACAG TGCTAATACG
CAATCGAACG TTGCAGATGC TAAGAGCCGT ATTGTTGATG TGGATTTTGC AAAGGAAACC
TCTGCAATGA CGAAGAACCA AGTACTGCAA CAAACTGGTT CAGCTATGTT GGCTCAAGCG
AATCAATTGC CACAAGTGGC GTTGTCATTA CTTTAA
 
Protein sequence
MAITVNTNVT SMKAQKNLNA SGNALATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG 
LDVGMRNAND GISVAQIAEG AMQEQTNMLQ RMRDLSVQAV NGANSTSDKD AIQAEIDQLA
LEITAISNTT AFGDTKLLSG GFTAKNFQVG HQEGENISIS ISGTDASTLG VEGLLVSSDG
AASTSIGLID TAIKTIDTQR AKLGATQNRL SHNISNSANT QSNVADAKSR IVDVDFAKET
SAMTKNQVLQ QTGSAMLAQA NQLPQVALSL L