Gene Shew185_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2943 
Symbol 
ID5369753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3526344 
End bp3527708 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content37% 
IMG OID640831187 
Productflagellar hook-associated 2 domain-containing protein 
Protein accessionYP_001367140 
Protein GI153001459 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA CAGCAACAGG CATAGGTTCA GGCCTTGATA TTGGTAATAT CGTTAAGGTA 
TTAGTTGATG CTGAGAAGAC ACCCAAAGAA GCAATGTTTA ATAAGACCGA GGATGCTATT
AAAGCTAAAG TCTCGGCAAT TGGCTCTTTA AAAAGCGAGT TAGCTAAGTT TCAAGATGCA
CTTAAAAAAC TTCAGTCTGG AGATGCACTG AATCAACGGA AGGTTTCTAC TGGCGATAGT
CAGTATGTTA CTGTAACCGC GGATAAAAGT GCAAAAGCTG GTAGTTACAG CATAAAAGTA
GAACAATTAG CTGTTAGTCA TAAAGTGGCT GGAACAAATG TTGCGGATCG TACTCTCGGA
GTAGGAGAGG GAACACTAGA TTTTGGTATT AATGGTAGCT CTTTTTCAGT TCCCGTTTTA
GCAACTGACT CACTTGATGA GATTGCTAAA AAAGTAAATT CAGCCTCTGG TAATGAGTCC
GTTACTGCAA CCGTTATCAC GAGTGATGCA GGTAGTCGGA TTGTTTTTAG CTCAGATAAA
TCGGGCGAAG ATAATCAAAT CACAATTACC GCAAATGATA CTTCTGGCAC TGGTTTGTCA
GATATGTTTG GTGCAGGTAA TCTTTCAACT CTTCAAGATG CAAAGAATGC TATTATTTAT
ATTGATGATC AGAAAGTAAC GTCCCAGAGC AATGAGATTA AAGGTGCTAT AACTGGTGTT
ACCATGAACC TAACCTCTGC TGATGTATCC AAAACAACAA CTCTAAAAAT TGAACAGGAC
AATGATGCTG TTAAAGATAA TGTGAAGGCT TTTGTTGAAG CTTTCAATAG CTTAAATGCC
TCGATCGATA AAATGTCAGC ATATGATAAA GATAAAAAAA CTGCATCGGC TTTGCAGGGT
GATTCAATGA TTCGTTCAAT TGAATCACAG TTACGGAATA TGATCAGTGA GAGAGTTACT
ACAGATTCTG GTAATGTAGC ACTTTACGAT ATAGGTATCA AAACAGATAA ATATGGTAAA
TTATCAATCG ATGAAACTAA GCTTGATAAA GTTATAAATG AAGATATGTC AAGTGTTGAA
CAGTTATTTG CTACCAAAGA TACGGGTTTA GCAAATAGAT TAGATAACTT ATCGAATAAT
TATGTTAAGA GCGATGGTTT AATCGCTGGC CGTCAAAATT CTTACACGAG CCAACAGAAA
CGCCTTGATG AACAAAGAGA GGCTTTTTCT TTAAAAATGG AACAATTAAC TGCACGCTTA
ACTAAACAGT TCAATGCAAT GGATTTGGTT GTTGGGCAAC TTAATCAGCA AAGTTCTGGT
TTAGCAGATC GCTTAAACTC ACTTCCAGGG GTTGTATCTA AATAG
 
Protein sequence
MALTATGIGS GLDIGNIVKV LVDAEKTPKE AMFNKTEDAI KAKVSAIGSL KSELAKFQDA 
LKKLQSGDAL NQRKVSTGDS QYVTVTADKS AKAGSYSIKV EQLAVSHKVA GTNVADRTLG
VGEGTLDFGI NGSSFSVPVL ATDSLDEIAK KVNSASGNES VTATVITSDA GSRIVFSSDK
SGEDNQITIT ANDTSGTGLS DMFGAGNLST LQDAKNAIIY IDDQKVTSQS NEIKGAITGV
TMNLTSADVS KTTTLKIEQD NDAVKDNVKA FVEAFNSLNA SIDKMSAYDK DKKTASALQG
DSMIRSIESQ LRNMISERVT TDSGNVALYD IGIKTDKYGK LSIDETKLDK VINEDMSSVE
QLFATKDTGL ANRLDNLSNN YVKSDGLIAG RQNSYTSQQK RLDEQREAFS LKMEQLTARL
TKQFNAMDLV VGQLNQQSSG LADRLNSLPG VVSK