| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2940 |
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| Symbol | |
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| ID | 5370867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3523854 |
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| End bp | 3525287 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640831184 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001367137 |
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| Protein GI | 153001456 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.568996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA CAGATCAACG AATTTTACTT ATTGGCCCCC CATCAGAGCG ATTAAATCGC
CTGTGTTGCA TTTTTGATTT TTTAGGTGAG CAAATTGCTC AAATTGACGC CGAAAAATTA
AGTGCTAGCC TCCAAGATAC CCGTTTTCGA GCCTTAGTTA TCCTAACTGA TGTTATGGAT
GCTGATGCGC TTAAAAACAT CGCGGGTCAA CATCCATGGC AACCTATGCT GTTGCTTGGC
AACGTTGACG ATCTGCAAGT GTCTAACATT CTTGGAAATA TTGAGGAACC TTTAACCTAT
CCTCAACTCA CCGAATTATT ACACTTCTGC CAAGTATTTG GCCAAGTTAA GCGCCCTCAA
GTCCCCACAA GTGCAAATCA AACTAAGTTA TTCCGAAGCT TGGTTGGGCG CAGTGATGGT
ATTGCCAATG TAAGACACTT GATTAATCAA GTGGCGACAT CTGAGGCGAC TGTACTAGTA
CTGGGTCAAT CCGGTACCGG TAAAGAAGTG GTCGCCCGTA ATATCCATTA TTTGTCTGAG
CGTCGTGATG GCCCTTTTAT TCCTGTTAAC TGTGGTGCTA TACCGCCAGA GTTATTAGAG
AGTGAACTTT TTGGTCATGA GAAGGGATCA TTTACTGGGG CTATCTGTTC TCGTAAGGGC
CGTTTCGAAT TGGCGGAAGG TGGCACACTA TTTCTCGATG AAATTGGTGA CATGCCATTG
CAGATGCAAG TTAAATTGCT TCGTGTACTG CAAGAACGGG TATTTGAGCG TGTTGGCGGC
ACTAAGACCA TCAATGCCGA TGTGCGCGTT GTAGCAGCGA CACATAGAGA TTTAGAAACC
ATGATCAGCG TGAATGAGTT CCGCGAGGAT CTCTATTACC GCCTAAACGT ATTCCCGATT
GAAATGCCTG CGCTATGTGA TCGCAAGGAC GATGTGCCTT TGCTATTACA AGAGTTGGTT
AGCCGAGTCT ATAACGAAGG CCGTGGCAAG GTGCGCTTTA CGCAGCGTGC GATTGAGTCG
TTAAAAGAGC ATGCTTGGTC GGGTAACGTG CGTGAGCTGT CTAATTTAGT CGAACGCCTC
ACCATTTTAT ATCCGGGTGG ACTGGTTGAT GTGAACGACT TACCCGTTAA GTACCGCCAT
ATTGATGTAC CCGAATATTG TGTAGAGATG AGCGAAGAGC AGCAAGAACG TGATGCATTG
GCTTCTATCT TTAGTGATGA AGAGCCGGTT GAAATCCCTG AGACACGTTT CCCAAGTGAG
CTACCGCCTG AAGGTGTGAA CCTTAAGGAT TTGTTAGCAG AACTGGAAAT CGACATGATA
CGTCAGGCAC TAGAGCTGCA AGATAACGTT GTTGCTCGCG CGGCTGAGAT GCTAGGAATA
CGTCGTACAA CGCTAGTAGA AAAAATGCGT AAATACGGAA TGACCAAAGA TTAG
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| Protein sequence | MMQTDQRILL IGPPSERLNR LCCIFDFLGE QIAQIDAEKL SASLQDTRFR ALVILTDVMD
ADALKNIAGQ HPWQPMLLLG NVDDLQVSNI LGNIEEPLTY PQLTELLHFC QVFGQVKRPQ
VPTSANQTKL FRSLVGRSDG IANVRHLINQ VATSEATVLV LGQSGTGKEV VARNIHYLSE
RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAICSRKG RFELAEGGTL FLDEIGDMPL
QMQVKLLRVL QERVFERVGG TKTINADVRV VAATHRDLET MISVNEFRED LYYRLNVFPI
EMPALCDRKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL
TILYPGGLVD VNDLPVKYRH IDVPEYCVEM SEEQQERDAL ASIFSDEEPV EIPETRFPSE
LPPEGVNLKD LLAELEIDMI RQALELQDNV VARAAEMLGI RRTTLVEKMR KYGMTKD
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