| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2927 |
|---|
| Symbol | |
|---|
| ID | 5371184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3510259 |
|---|
| End bp | 3510681 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640831171 |
|---|
| Product | flagellar biosynthesis protein FliO |
|---|
| Protein accession | YP_001367124 |
|---|
| Protein GI | 153001443 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3190] Flagellar biogenesis protein |
|---|
| TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAT CGGTAATACA CAGTGTAGTG GCAGCGGTTC AAACGAGCGC CGATAGCCTC
GAAGGCGCAG CGAACATGAC TCCAGTCGTT CCTACAGCTG CAAAAATGGC TGAACCTTCT
CAAGTCGCAA CCCTAGCGAG TATGTTAGGT GGCTTAATTC TGGTTTTACT CTTAATTTTT
GCGTTAGCTT ATCTACTGAG GCGATTCAAT TTAGTACCCA CTACCAACGG TGTTCTAAAA
ACGATAGCCG TGACTTCCCT TGGTCAAAAA GAACGTTTAG TCTTGGTACA GGTGGGGGAA
CAGCAATATT TACTTGGAGT GAGCTCGCAG CAGGTGAGTT TGATTGATAA GTTAGCTGAA
CCTATCCATA TAGAGTCTGA TTCCTTTGCG AGTCGGCTAC GTCAGGCGAA ATTAAAACAA
TGA
|
|---|
| Protein sequence | MSTSVIHSVV AAVQTSADSL EGAANMTPVV PTAAKMAEPS QVATLASMLG GLILVLLLIF
ALAYLLRRFN LVPTTNGVLK TIAVTSLGQK ERLVLVQVGE QQYLLGVSSQ QVSLIDKLAE
PIHIESDSFA SRLRQAKLKQ
|
|---|
| |