Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2926 |
Symbol | fliP |
ID | 5371183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3509516 |
End bp | 3510262 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640831170 |
Product | flagellar biosynthesis protein FliP |
Protein accession | YP_001367123 |
Protein GI | 153001442 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.766938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAC GTATCCTCGC GTTAGTTGGC TTAGTTATTC TGTTATGTAT GCCGTCGGCC TGGGCTGCCG ACGGTGTTTT GCCTGCGGTT ACCGTAACAA CAGGACCTGA CGGTTCAACA GAATACTCGG TCACAATGCA GATTTTACTG TTGATGACAT CGCTGAGTTT TTTACCTGCG ATGCTCATTA TGTTGACCTC TTTCACACGG ATCATCATCG TTCTGTCAAT ATTACGTCAA GCCATTGGGT TACAACAGAC GCCGTCTAAT CAAGTCTTAA TTGGTATGAG TTTATTCATG ACCTTCTTTA TTATGGCGCC GGTGTTTGAC CGGATTTATG ACGAAGGGGT TAAGCCTTAC ATAGAAGAGC AGTTAACCTT GCAGCAAGCG TTTGAAAAAG GCAAAGAGCC ACTCAAAGGT TTTATGTTGG GGCAAGTCAG GACCACTGAC TTAAAAACTT TTATCGAAAT TTCAGGCTAT AAGAACATTA AGTCGCCCGA AGAAGCTCCG ATGAGTGTGC TGATCCCCGC CTTTATTACC AGCGAGTTGA AAACAGCTTT TCAAATTGGC TTTATGTTGT TCGTGCCATT TTTAGTGTTA GATCTTGTGG TGGCCAGTAT CTTAATGGCC ATGGGTATGA TGATGTTATC TCCTATGATA GTGTCGCTAC CGTTTAAGAT TATGCTGTTT GTGCTCGTCG ATGGTTGGAG CTTAGTCCTA GGGACATTAG CGAATAGTTT CGGGTAG
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Protein sequence | MTTRILALVG LVILLCMPSA WAADGVLPAV TVTTGPDGST EYSVTMQILL LMTSLSFLPA MLIMLTSFTR IIIVLSILRQ AIGLQQTPSN QVLIGMSLFM TFFIMAPVFD RIYDEGVKPY IEEQLTLQQA FEKGKEPLKG FMLGQVRTTD LKTFIEISGY KNIKSPEEAP MSVLIPAFIT SELKTAFQIG FMLFVPFLVL DLVVASILMA MGMMMLSPMI VSLPFKIMLF VLVDGWSLVL GTLANSFG
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