Gene Shew185_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2922 
SymbolflhA 
ID5372606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3504994 
End bp3507093 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content45% 
IMG OID640831166 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_001367119 
Protein GI153001438 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.268541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTTA AAGCGACTCT TGGTCAAGTA AAACAAATGC GGCTGAGCTC ATTCAAAGGC 
ATTGGTACGC CTATGGTTGT GCTTGCTGCA TTGGCCATGA TTGTTTTACC TATCCCTCCA
TTTCTATTAG ACATACTTTT CTCATTCAAC ATAGCCTTAG CGCTCATCGT ATTGTTAGTC
GCAATTTATA CCGATAGGCC ATTAGATTTC GCCGCTTTTC CAACTGTATT GCTGGTGGCG
ACATTACTAC GACTCGCACT CAACGTCGCT TCAACTCGTG TGGTATTACT CGAAGGCCAT
AATGGTGGTG ATGCGGCAGG TAAGGTGATC GAAGCCTTCG GTTCTGTGGT GATTGGCGGT
AACTATGCGG TTGGTTTAGT TGTATTTATC ATTTTGATTA TTATCAACTT TGCGGTGGTG
ACAAAAGGTG CCGGTCGTAT AGCAGAAGTG AGCGCCCGCT TTACCTTGGA TGCTATGCCA
GGTAAGCAAA TGGCAATTGA TGCCGATTTA AATGCTGGAA CCTTAAACCA AGACCAAGCA
AGAATACGTC GCGCCGAAGT GACCCGTGAA GCTGATTTTT ATGGCGCGAT GGATGGTGCT
TCAAAATTCG TAAAAGGTGA TGCCGTTGCG GGTATCATGA TTTTAGTGAT CAACATCTTA
GGTGGTTTCA TCATAGGTAT TGTTCAGCAT GGCTTAAGTT TCTCTGAAGC GGTTGAAATT
TATACCTTGC TGACTATCGG TGATGGTCTG GTGGCGCAGA TCCCAGGCTT ATTACTGTCA
ATCGCTGCCG CCTTGATGGT AACCCGTCAA AATGAATCGG GCGATATGGG CCAAATGATG
ATGAGTCAGA TGTTTGACAG TCATAAATCA TTGGGTATCG CCGCCGGAGT GTTATTTGTC
ATGGGTATTG TTCCTGGCAT GCCACATATG GCGTTCTTAA GCTTCGCCTT TATTACTACG
GGTGCTGCCT ATTTTGTCTA TAAGCGTAAT GAATCAAAAC GCATTAAAGC CCTAGAACAA
GTCAAATCTG GCCCGATTGA GAGACAAGAT AAAGAGCCTA AAGAACTGGG TTGGGATGAT
GTACATCATG TTGATACTAT TGGGCTTGAG GTTGGATATC GCTTGATCCC ACTGGTCGAT
AAGGGCCAAG GTGGCGAGTT ATTAAGCCGT ATAAAAGGAG TCCGTAAGAA GTTATCGCAA
GAGTTGGGCT TCTTAGTACC TGCGGTGCAT ATTCGCGATA ACTTAGATTT GTCACCTAAT
GCCTACCGCA TTTCTCTAAT GGGCGTAGTC GTTGGTGAGG CGGATATTCG TCACGATTGT
GAATTGGCGA TTAATCCTGG CCAAGTCTAT GGCAAGCTTG ATGGTATCGA AACGCGCGAT
CCAGCTTTTG GTCTTGAAGC GGTATGGATT GCCCCTGAAT TACGTGAACA TGCCCAAACA
TTAGGGTATA CCGTCGTTGA TGCCGCCACA GTTGTGGCAA CCCATATTAG TCAATTGTTG
ACCAATAATG CTGCTAAGTT GTTAGGATAT GAAGAAGTGC AACAACTGAT GGATATGCTT
GCGAAACACT CGCCTAAGCT GGTGGATGGC TTTATTCCTG ATGTCATGCC ACTAGGACAT
GTCGTAAAAG TGATGCAGAA CCTATTAAAT GAAGGGGTTT CAGTCAGAGA CTTGCGTACT
ATAGTGCAAA CTTTGTTAGA ATACGGCACT AAGAGTAATG ACACTGAAGT CTTGACCGCT
GCAGTGCGTA TCGCGTTGAA ACGTATGATC GTTCAGGAAA TTTCAGGCCC AGAGCTCGAA
ATCCCTGTCA TAACTTTGGC GCCAGAGTTG GAACAGATGT TGCATCAGTC AATGCAAGCA
ACCGGTGGTG ATGGTCCTAA CATTGAACCC GGTCTTGCAG AACGCATGCA GCAGTCCCTT
GCCGATGCGG CTCAGAAGCA AGAAATGGTC GGACAACCCG CCATATTGTT GACGTCAGGT
ATGTTACGCG CGACGCTGTC ACGTTTTGTT AAACATACTA TTCCTAATCT CAGAGTCATT
TCATATCAAG AAATACCTGA TGAGAAGCAA ATACGTATCG TATCTGCAGT CGGCCAGTAG
 
Protein sequence
MDVKATLGQV KQMRLSSFKG IGTPMVVLAA LAMIVLPIPP FLLDILFSFN IALALIVLLV 
AIYTDRPLDF AAFPTVLLVA TLLRLALNVA STRVVLLEGH NGGDAAGKVI EAFGSVVIGG
NYAVGLVVFI ILIIINFAVV TKGAGRIAEV SARFTLDAMP GKQMAIDADL NAGTLNQDQA
RIRRAEVTRE ADFYGAMDGA SKFVKGDAVA GIMILVINIL GGFIIGIVQH GLSFSEAVEI
YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQMM MSQMFDSHKS LGIAAGVLFV
MGIVPGMPHM AFLSFAFITT GAAYFVYKRN ESKRIKALEQ VKSGPIERQD KEPKELGWDD
VHHVDTIGLE VGYRLIPLVD KGQGGELLSR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN
AYRISLMGVV VGEADIRHDC ELAINPGQVY GKLDGIETRD PAFGLEAVWI APELREHAQT
LGYTVVDAAT VVATHISQLL TNNAAKLLGY EEVQQLMDML AKHSPKLVDG FIPDVMPLGH
VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSNDTEVLTA AVRIALKRMI VQEISGPELE
IPVITLAPEL EQMLHQSMQA TGGDGPNIEP GLAERMQQSL ADAAQKQEMV GQPAILLTSG
MLRATLSRFV KHTIPNLRVI SYQEIPDEKQ IRIVSAVGQ