Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2905 |
Symbol | |
ID | 5370179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3487072 |
End bp | 3488574 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640831149 |
Product | amino acid/peptide transporter |
Protein accession | YP_001367102 |
Protein GI | 153001421 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000347826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAG CAAAACCACA AGGAACGATG CTTGGGCATC CTAAGGGATT GTTCCTGCTG TTTACAACAG AACTTTGGGA ACGTTTTAGT TATTATGCAA TGCGCGCCAT TTTGGTGTTT TATTTAACAG ATCAAGTAGC AAATCAAGGT GGAGGGTTAG GTTGGACATC CGCAGATGCT CTTCGCCTAT ACGCATGGTT CACAGGACTT GTTTACCTCA CGCCTCTTCT CGGCGGTTGG CTAGCAGATA ACTATCTAGG CCAACGCAAA GCTATTTACA TTGGTGGTAC CATGATGGCT GCTGGTCAGT TTTTGCTGGC AACACCTCAT GCATGGATTT TAGGATTCGA GACAACTGTC TTCTACTGTG GTTTGGCAAG CTTGATCTTG GGCAACGGCC TATTTAAACC TAACATTTCT ACAATGGTAG GTGACTTATA TAATGAAGGC GACCACAGAC GAGATGGTGC CTTTACTGTT TTTTATATGG GGATAAACGT TGGTGCAGCG CTTGCCGGTA TTTTAGTCGC AGAAGCTTAT GAAGGTTTTG GTAGTATTCA AGTATTAGAC GGAAAAGAAA TCTTTGTTAA AAACTGGCAA GCCGGATTTG TGTGCGCTGG TATAGGTATG CTCCTTTCAT TAGTTATTCA ATTCTTTTTC GCACAGAAAC TATTAGGTAA TATTGGTAAA GAGCCTGCGG CAAAATTGGA ACGAGAGTTA AACGAGAGAC GGGGACAAGT AAGAAGTGAG CCTCTTACCA AGGTCGAGCG AGATCGCATC AAAGTCATTA TGATCATGGG CCTGTTTACA ATTATTTTCT GGGCTGGTTT TGAGCAAGCA GGTGGCCTAA TGAACTTGTT CACAAACGAG TTTACAGACC GTATGATTGG TAGCTGGGAA GTGCCAACGA CATATTTTCA GTCGCTAAAT GCAATATTCA TTGTGTTATT TGCCCCAGTT GTGGCTTCGA TCTGGATAAG ATTAGGTAAT AGTGAACCAA ATTCGCCAGT AAAATTTGCT CTCGGTCTAG TATTATTGGG AATAGGCTTC CTGTTCATGA TTGGTGCAGT CCTCGAGATG GGCGGTGATG CATCAGCCAA ATCAAGTATG TGGTGGTTAG TGGGCGCTTA TTTCTTCCAC ACTATGGGTG AACTTTGTTT ATCCCCAATT GGCTTATCTA TGGTGACTAA ACTTGCTCCA CTGAGAATGA TCTCACTCTT AATGGGCGCT TGGTTTACAT TCATTTTTAT TGCGAATTTA ACGGCTGGAT ACATAGGCTC ATTCATCGGC CATGGCGGTG AAAAGGAAGA GCAACTGGCA AATGCAATGG CGATCTTCTC TGGCATTGCC ATCACAGCAG CTCTTTCAGG CATTATTCTG TATTTTATGG CTGATAAATT AGTGGACTGG ATGCATGGCG CTGAAAGCAA GCATCAGACT GAAGCTGAAA TATTAGAAAG TGAAATTGCT GTAACTGCTG AGCATGAAGC AATAAAACGC TAA
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Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVF YLTDQVANQG GGLGWTSADA LRLYAWFTGL VYLTPLLGGW LADNYLGQRK AIYIGGTMMA AGQFLLATPH AWILGFETTV FYCGLASLIL GNGLFKPNIS TMVGDLYNEG DHRRDGAFTV FYMGINVGAA LAGILVAEAY EGFGSIQVLD GKEIFVKNWQ AGFVCAGIGM LLSLVIQFFF AQKLLGNIGK EPAAKLEREL NERRGQVRSE PLTKVERDRI KVIMIMGLFT IIFWAGFEQA GGLMNLFTNE FTDRMIGSWE VPTTYFQSLN AIFIVLFAPV VASIWIRLGN SEPNSPVKFA LGLVLLGIGF LFMIGAVLEM GGDASAKSSM WWLVGAYFFH TMGELCLSPI GLSMVTKLAP LRMISLLMGA WFTFIFIANL TAGYIGSFIG HGGEKEEQLA NAMAIFSGIA ITAALSGIIL YFMADKLVDW MHGAESKHQT EAEILESEIA VTAEHEAIKR
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