| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2904 |
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| Symbol | |
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| ID | 5370178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3486088 |
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| End bp | 3486594 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640831148 |
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| Product | transcriptional acivator RfaH |
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| Protein accession | YP_001367101 |
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| Protein GI | 153001420 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00160957 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGCAT GGTACCTTTT GTATTGTAAG CCTCGTAGTG AAGCGAGAGC GCAACAAAAC
TTAGCACTTC AAAATTTAGA GACGTATTTA CCTATGGTCT CTGAAGAGAA ATCTCAACGC
GGGCGGAAAC AGGTCTGTCG TGTACCACTA TTCCCTAATT ATTTATTCAT CAATTTCGAC
CCAAGCCAAA CAAGCGTTAG GCAGGTCCAC TCTACTCGTG GTGTGAATCG AATCGTTAAT
TGTCAAGAAA AAATGACGCC CATTGACGAC AGAATTATCC ATACCATTCG CATGAAAGAA
TTAACGCCTT CCCAAACGGT ATTAGCTGAA GCATTAGAGC TAAAAACTGG GGAAAAAATT
CGTTTTACAG ATGGACCGTT TGTTGATCTC GAAGGTATTT TTCAAGAAAA ATGCCCAAAT
AAGCGTTGTC ATGTTCTTTT TAACATTATG GGGCAGATAA AGACGGTTAC GGTACCACAG
CAAAGTGTGG AACGAATTTG TGTTTAA
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| Protein sequence | MKAWYLLYCK PRSEARAQQN LALQNLETYL PMVSEEKSQR GRKQVCRVPL FPNYLFINFD
PSQTSVRQVH STRGVNRIVN CQEKMTPIDD RIIHTIRMKE LTPSQTVLAE ALELKTGEKI
RFTDGPFVDL EGIFQEKCPN KRCHVLFNIM GQIKTVTVPQ QSVERICV
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