Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2887 |
Symbol | |
ID | 5369370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3465155 |
End bp | 3465838 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640831131 |
Product | hypothetical protein |
Protein accession | YP_001367084 |
Protein GI | 153001403 |
COG category | [S] Function unknown |
COG ID | [COG3758] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATCCGCT ATCAAGATTG CCCATCTACG CCATGGAAAA ATGGCGGTGG GAGCACAAAA CAGCTACTTA TTTCCCCCAT CAATGCCGAA CTTACTGAAT TCGATTATCG GATCAGCATA GCAAGCATTG GCAGCAACGG ACCCTTTTCA TTATTTAATG GCATAGACAG ACAACTGGTC ATCCTAGAAG GCGATGGTGT TGAACTCAGC ATCGATAGCC ATGAAGGGGA AAAACAGATA AATGACCTTG GAGCAAATGA AAAGATACAG GGATACACAG ATACAACTGA GTATAAACAA CTCACGCCCA TAAATAGTCC CTTCTGCTTT ACAGGCGAAA CCTCAATAAC AAGCCAACTA TTAGGTAGTG ATGTTATTGA TTTCAATGTG ATGACCAAAC GCGGTGCATT TAAAGCACAT ACTCAAAGGC TTAACTTTGA TAGCATATTT ATAGAAGAAT ATGCTGCAAT TACAAACAAC AATAAAAGTG AACACCACAA GACTGAAGCT GACGCAACTA TCATCCAACT GCTCTGCTGC TTAGATACAA TGACATGGGA GCACAATGGC AAGTTCATCA AGATCATGCC CTATGACATG CTTATCATTA AATCAGGCGA AGATATAAAA TTAGCAGCGA CAGCACCAAG TCGATTACTT AGCGTCACCA TTACGGCCTG TTAA
|
Protein sequence | MIRYQDCPST PWKNGGGSTK QLLISPINAE LTEFDYRISI ASIGSNGPFS LFNGIDRQLV ILEGDGVELS IDSHEGEKQI NDLGANEKIQ GYTDTTEYKQ LTPINSPFCF TGETSITSQL LGSDVIDFNV MTKRGAFKAH TQRLNFDSIF IEEYAAITNN NKSEHHKTEA DATIIQLLCC LDTMTWEHNG KFIKIMPYDM LIIKSGEDIK LAATAPSRLL SVTITAC
|
| |