Gene Shew185_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2887 
Symbol 
ID5369370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3465155 
End bp3465838 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content41% 
IMG OID640831131 
Producthypothetical protein 
Protein accessionYP_001367084 
Protein GI153001403 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCGCT ATCAAGATTG CCCATCTACG CCATGGAAAA ATGGCGGTGG GAGCACAAAA 
CAGCTACTTA TTTCCCCCAT CAATGCCGAA CTTACTGAAT TCGATTATCG GATCAGCATA
GCAAGCATTG GCAGCAACGG ACCCTTTTCA TTATTTAATG GCATAGACAG ACAACTGGTC
ATCCTAGAAG GCGATGGTGT TGAACTCAGC ATCGATAGCC ATGAAGGGGA AAAACAGATA
AATGACCTTG GAGCAAATGA AAAGATACAG GGATACACAG ATACAACTGA GTATAAACAA
CTCACGCCCA TAAATAGTCC CTTCTGCTTT ACAGGCGAAA CCTCAATAAC AAGCCAACTA
TTAGGTAGTG ATGTTATTGA TTTCAATGTG ATGACCAAAC GCGGTGCATT TAAAGCACAT
ACTCAAAGGC TTAACTTTGA TAGCATATTT ATAGAAGAAT ATGCTGCAAT TACAAACAAC
AATAAAAGTG AACACCACAA GACTGAAGCT GACGCAACTA TCATCCAACT GCTCTGCTGC
TTAGATACAA TGACATGGGA GCACAATGGC AAGTTCATCA AGATCATGCC CTATGACATG
CTTATCATTA AATCAGGCGA AGATATAAAA TTAGCAGCGA CAGCACCAAG TCGATTACTT
AGCGTCACCA TTACGGCCTG TTAA
 
Protein sequence
MIRYQDCPST PWKNGGGSTK QLLISPINAE LTEFDYRISI ASIGSNGPFS LFNGIDRQLV 
ILEGDGVELS IDSHEGEKQI NDLGANEKIQ GYTDTTEYKQ LTPINSPFCF TGETSITSQL
LGSDVIDFNV MTKRGAFKAH TQRLNFDSIF IEEYAAITNN NKSEHHKTEA DATIIQLLCC
LDTMTWEHNG KFIKIMPYDM LIIKSGEDIK LAATAPSRLL SVTITAC