Gene Shew185_2878 details

Gene Information

• Locus tag: Shew185_2878
• ID: 5369677
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3455196
• End bp: 3455903
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640831122
• Product: putative lipoprotein
• Protein accession: YP_001367075
• Protein GI: 153001394

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000189272
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATATAC ACAAAAAATT AGTATCACTA ATCACCCTCT CGCTTGTGTT ATTGAACACA 
ACAGCTTGTA GCCAAAGAAT CGGTGCGCTT AACGACACAT TGAAACTCGC CTTTATTGGT 
GATAAAGACG TTAAGTTGTC TACGCAACAA GTCAACGATA TTCCCTACGC CAGTATTTAC 
GCTCAAATTG GCGATATGTC ACAGGTGTTT ATTGTACTTG TATTTGCAGA ACCCAAAGTT 
AGTTTAACGC AAGTACCGAC AACACTTAGT ACAGAATTGA AATGGCTCTC TGCGGATAAG 
GGCATGATAG TTACTGTGAA TGGCCGTTTA GTGCGGACTC ACAATAATCC AACCGGGGAT 
TTAGTTGCAG TAGAGAGCAC AGAACCGGAT CCGATTATGT TAGGTTTGCA ATTAGCTTCT 
ACCCCCAAAA CTTGGACTCG AATAATTGAC TGGCAACCCG GCTATCATTT TGGCTACAGA 
GCCACCTCCT ATTTTAATTT GGTCGGTCAA GAAAAAATTC TTATCAATGA TATTCCTACT 
CAAGCGCTGC ATTACAGTGA AATTGTCTTA GTCGATGATC TTAATATTCA GTACCAAAAT 
GAATTTTGGC TAACACCTGA GACAGGAAAT GTAATTAAGA GTCGCCAGAA GATTGCACCC 
AATCTGCCTT TTATCGACAT TTCATTACTC AAGCCGTTTG CATCTTAG 

 

Protein sequence

MHIHKKLVSL ITLSLVLLNT TACSQRIGAL NDTLKLAFIG DKDVKLSTQQ VNDIPYASIY 
AQIGDMSQVF IVLVFAEPKV SLTQVPTTLS TELKWLSADK GMIVTVNGRL VRTHNNPTGD 
LVAVESTEPD PIMLGLQLAS TPKTWTRIID WQPGYHFGYR ATSYFNLVGQ EKILINDIPT 
QALHYSEIVL VDDLNIQYQN EFWLTPETGN VIKSRQKIAP NLPFIDISLL KPFAS