Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2862 |
Symbol | |
ID | 5369427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3433751 |
End bp | 3435847 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831106 |
Product | hypothetical protein |
Protein accession | YP_001367059 |
Protein GI | 153001378 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATTT TCACCTCTAG AAAACTGGCA TACTTAGTGG CTCTAGCACT AACTGGTGCT CTTGTTGGTT GTGGCGATGA TGGCAAAGAT GGTGTCGATG GCACGCCAGG TATTCCGGGA ACACCTGGCA CGCCTGGCAC ACCCGGAGAA CCCGGAACAC CGCCCCCAGT CACTAGCTCA ACGCTGACGA ACGTCAAAGT GATCAACTAC AGCTTTGGCG AAGGCAGTAT CAGTTACGAA TTTGAAATTA CCGATGAGAA TAATAATTTA ATCAACGGGC TGCAAAACGC TGAGGCTAAA GTCGCGGCGT TAACCGATAA AGGTTTCATC AATAACCGTA CCGAAAGTGA TCTTAATGGC GTTGCAGACA ATGTGCATAT TGGTGGCGCG GCAACTCAAG CGACAGAAGG CGCTACACTG ACCTCTTTAG GCGACGGTCA CTACACTTTT GTGGCCCCAA TGTTAGGGGT AAACCCGAGC ACTGAAGGTA TTGTGTGGTT ACGCGTTGGC GGCAATAGCG CAACAGGTAT CGCACGTTCA GCCCCCTTAG TTGTCAATAA ACCCGAAGGT ACTCATTCCA CCACAACCGA TAGTTGCTAT TCGTGTCACG TCGATTACGC AACCAGTCCT CGCCGCCATG CAAGCTATGT TGCAACCGGT ATGGACGGTG AAGTCACTTT CGTAGAAGGC TGTTTAGCAT GTCACGGCTC AGTGAGTCGC GGCGCTGTCA ATGCGGAAGG TTTCTCTGTG GGTGGCTACG CGACTAACAC CCTGTCTAAG ATTGGCCATG TTAATCACCA AGATTTTACT AAAGACTTTT CAGTACAAAA CTGTACATCT TGTCACGTTG AAGCTCCAAC TAACATCAAC GTAGCAGGAC CCGGTTGTAT CGATTGCCAT GATAGCGGTG GTGTGCCAGG TGTCATCATC CCAAGTAATG GTGCCGATGT CCGTACTATG CATGAAGGTA AGTCAGGTAT TACTGAACGC CAAGCCATTC GCGCTAAGTA CAAAGTGACA TTAGCGGCCC CAGTTAAAGT CGATGATATA TCAACGAAAA CAGATCACTA TGCGCCAACA GGTGCTGCAG CCGCAGTCGC CGCCCCTGGC TGGTGTACAA CACTTACTGT AAAAGATGTC GATGGCAATA TCTTTAGTAT CAAAGATAAC TTCAACTACT CAGATCCGCT GGTGTTTGAT GCCAAGAAAC CGCTGGTCTA TGCCAGCGCC TATCTGCACG CCTATGACAA TGGCAGTTTA GTGGGCCGCC CAGGAAACCG TACTAACTAT TACTATGGTT ACAACACCGA CGGCACTAAA AATATCTGTC ATTTACTGAC GGATATCAGC GCAGTGAATG CTAACTATGT TTACTCTGCC CGCGTGACAT TCAGTACCGC AGGTTGGATG GAATATGATG GCAATCAACG TTATCAAAGT AATGGCAGCC TAAGAGCGAC AGGTTATGAC GGTTCTATGG GCGTATCCTT TACCGCCTAC TCAGACGTCG TTAACCCAGT CACGACTCAA AAAGTCTCTG GCTTCGAGCG TCGTGAGATA GTGAGCGCTA ACAGCTGTAC TACTTGTCAT AACGATGCCA CTGCATTCCA CAAAAATGGG GCCTTCGATG ACGGCGGTAA TGGCTGTATT GCTTGCCATG ACAACGGCAT GGCACGGACA TCAGCCGTCT TAGGCGCAGG TTTTGGTCCA ATGGTTCACA GCTGGCACTG GGGTAATGGC GCTAAAGTCG GTGAAATGAA AGCGGATGGA ACTCAAGCGA ATGCGGCTAA CGGTGCAGGG GCGATCAATC CTGTCACCAG TTGTGTTGCC TGCCATGATA AAGCGATTGA TTTAGATAAA ATTCCAAATC AATACATTTT AGAACCCGGT AGCAAGATGA CAAGCCCTGT ATCTGCAAAC TGCTATGCCT GCCATACGAT TGATTCTGCG AAAGCGCACA TGGTGAGTAA CGGTGGTGAG ATCAGCGTTC ATAGCGTGGC AGATTGGTTT AAACAACCAA CGACTGAATC CTGTGCAGTA TGTCATAACA CAGGTAGAAG CTCTGGTATT GATAAATACC ACAAGTTTAC TCGCTAA
|
Protein sequence | MRIFTSRKLA YLVALALTGA LVGCGDDGKD GVDGTPGIPG TPGTPGTPGE PGTPPPVTSS TLTNVKVINY SFGEGSISYE FEITDENNNL INGLQNAEAK VAALTDKGFI NNRTESDLNG VADNVHIGGA ATQATEGATL TSLGDGHYTF VAPMLGVNPS TEGIVWLRVG GNSATGIARS APLVVNKPEG THSTTTDSCY SCHVDYATSP RRHASYVATG MDGEVTFVEG CLACHGSVSR GAVNAEGFSV GGYATNTLSK IGHVNHQDFT KDFSVQNCTS CHVEAPTNIN VAGPGCIDCH DSGGVPGVII PSNGADVRTM HEGKSGITER QAIRAKYKVT LAAPVKVDDI STKTDHYAPT GAAAAVAAPG WCTTLTVKDV DGNIFSIKDN FNYSDPLVFD AKKPLVYASA YLHAYDNGSL VGRPGNRTNY YYGYNTDGTK NICHLLTDIS AVNANYVYSA RVTFSTAGWM EYDGNQRYQS NGSLRATGYD GSMGVSFTAY SDVVNPVTTQ KVSGFERREI VSANSCTTCH NDATAFHKNG AFDDGGNGCI ACHDNGMART SAVLGAGFGP MVHSWHWGNG AKVGEMKADG TQANAANGAG AINPVTSCVA CHDKAIDLDK IPNQYILEPG SKMTSPVSAN CYACHTIDSA KAHMVSNGGE ISVHSVADWF KQPTTESCAV CHNTGRSSGI DKYHKFTR
|
| |