Gene Shew185_2862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2862 
Symbol 
ID5369427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3433751 
End bp3435847 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content48% 
IMG OID640831106 
Producthypothetical protein 
Protein accessionYP_001367059 
Protein GI153001378 
COG category 
COG ID 
TIGRFAM ID[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTT TCACCTCTAG AAAACTGGCA TACTTAGTGG CTCTAGCACT AACTGGTGCT 
CTTGTTGGTT GTGGCGATGA TGGCAAAGAT GGTGTCGATG GCACGCCAGG TATTCCGGGA
ACACCTGGCA CGCCTGGCAC ACCCGGAGAA CCCGGAACAC CGCCCCCAGT CACTAGCTCA
ACGCTGACGA ACGTCAAAGT GATCAACTAC AGCTTTGGCG AAGGCAGTAT CAGTTACGAA
TTTGAAATTA CCGATGAGAA TAATAATTTA ATCAACGGGC TGCAAAACGC TGAGGCTAAA
GTCGCGGCGT TAACCGATAA AGGTTTCATC AATAACCGTA CCGAAAGTGA TCTTAATGGC
GTTGCAGACA ATGTGCATAT TGGTGGCGCG GCAACTCAAG CGACAGAAGG CGCTACACTG
ACCTCTTTAG GCGACGGTCA CTACACTTTT GTGGCCCCAA TGTTAGGGGT AAACCCGAGC
ACTGAAGGTA TTGTGTGGTT ACGCGTTGGC GGCAATAGCG CAACAGGTAT CGCACGTTCA
GCCCCCTTAG TTGTCAATAA ACCCGAAGGT ACTCATTCCA CCACAACCGA TAGTTGCTAT
TCGTGTCACG TCGATTACGC AACCAGTCCT CGCCGCCATG CAAGCTATGT TGCAACCGGT
ATGGACGGTG AAGTCACTTT CGTAGAAGGC TGTTTAGCAT GTCACGGCTC AGTGAGTCGC
GGCGCTGTCA ATGCGGAAGG TTTCTCTGTG GGTGGCTACG CGACTAACAC CCTGTCTAAG
ATTGGCCATG TTAATCACCA AGATTTTACT AAAGACTTTT CAGTACAAAA CTGTACATCT
TGTCACGTTG AAGCTCCAAC TAACATCAAC GTAGCAGGAC CCGGTTGTAT CGATTGCCAT
GATAGCGGTG GTGTGCCAGG TGTCATCATC CCAAGTAATG GTGCCGATGT CCGTACTATG
CATGAAGGTA AGTCAGGTAT TACTGAACGC CAAGCCATTC GCGCTAAGTA CAAAGTGACA
TTAGCGGCCC CAGTTAAAGT CGATGATATA TCAACGAAAA CAGATCACTA TGCGCCAACA
GGTGCTGCAG CCGCAGTCGC CGCCCCTGGC TGGTGTACAA CACTTACTGT AAAAGATGTC
GATGGCAATA TCTTTAGTAT CAAAGATAAC TTCAACTACT CAGATCCGCT GGTGTTTGAT
GCCAAGAAAC CGCTGGTCTA TGCCAGCGCC TATCTGCACG CCTATGACAA TGGCAGTTTA
GTGGGCCGCC CAGGAAACCG TACTAACTAT TACTATGGTT ACAACACCGA CGGCACTAAA
AATATCTGTC ATTTACTGAC GGATATCAGC GCAGTGAATG CTAACTATGT TTACTCTGCC
CGCGTGACAT TCAGTACCGC AGGTTGGATG GAATATGATG GCAATCAACG TTATCAAAGT
AATGGCAGCC TAAGAGCGAC AGGTTATGAC GGTTCTATGG GCGTATCCTT TACCGCCTAC
TCAGACGTCG TTAACCCAGT CACGACTCAA AAAGTCTCTG GCTTCGAGCG TCGTGAGATA
GTGAGCGCTA ACAGCTGTAC TACTTGTCAT AACGATGCCA CTGCATTCCA CAAAAATGGG
GCCTTCGATG ACGGCGGTAA TGGCTGTATT GCTTGCCATG ACAACGGCAT GGCACGGACA
TCAGCCGTCT TAGGCGCAGG TTTTGGTCCA ATGGTTCACA GCTGGCACTG GGGTAATGGC
GCTAAAGTCG GTGAAATGAA AGCGGATGGA ACTCAAGCGA ATGCGGCTAA CGGTGCAGGG
GCGATCAATC CTGTCACCAG TTGTGTTGCC TGCCATGATA AAGCGATTGA TTTAGATAAA
ATTCCAAATC AATACATTTT AGAACCCGGT AGCAAGATGA CAAGCCCTGT ATCTGCAAAC
TGCTATGCCT GCCATACGAT TGATTCTGCG AAAGCGCACA TGGTGAGTAA CGGTGGTGAG
ATCAGCGTTC ATAGCGTGGC AGATTGGTTT AAACAACCAA CGACTGAATC CTGTGCAGTA
TGTCATAACA CAGGTAGAAG CTCTGGTATT GATAAATACC ACAAGTTTAC TCGCTAA
 
Protein sequence
MRIFTSRKLA YLVALALTGA LVGCGDDGKD GVDGTPGIPG TPGTPGTPGE PGTPPPVTSS 
TLTNVKVINY SFGEGSISYE FEITDENNNL INGLQNAEAK VAALTDKGFI NNRTESDLNG
VADNVHIGGA ATQATEGATL TSLGDGHYTF VAPMLGVNPS TEGIVWLRVG GNSATGIARS
APLVVNKPEG THSTTTDSCY SCHVDYATSP RRHASYVATG MDGEVTFVEG CLACHGSVSR
GAVNAEGFSV GGYATNTLSK IGHVNHQDFT KDFSVQNCTS CHVEAPTNIN VAGPGCIDCH
DSGGVPGVII PSNGADVRTM HEGKSGITER QAIRAKYKVT LAAPVKVDDI STKTDHYAPT
GAAAAVAAPG WCTTLTVKDV DGNIFSIKDN FNYSDPLVFD AKKPLVYASA YLHAYDNGSL
VGRPGNRTNY YYGYNTDGTK NICHLLTDIS AVNANYVYSA RVTFSTAGWM EYDGNQRYQS
NGSLRATGYD GSMGVSFTAY SDVVNPVTTQ KVSGFERREI VSANSCTTCH NDATAFHKNG
AFDDGGNGCI ACHDNGMART SAVLGAGFGP MVHSWHWGNG AKVGEMKADG TQANAANGAG
AINPVTSCVA CHDKAIDLDK IPNQYILEPG SKMTSPVSAN CYACHTIDSA KAHMVSNGGE
ISVHSVADWF KQPTTESCAV CHNTGRSSGI DKYHKFTR