| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2851 |
|---|
| Symbol | |
|---|
| ID | 5370054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3420132 |
|---|
| End bp | 3420836 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640831095 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_001367048 |
|---|
| Protein GI | 153001367 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAC TCAATAAAGT CGTCAGCAGC TATGAAGAAG CGTTAAACGG CTTATCAAAC
GACATGACCA TTATGGTCGG CGGCTTTGGC CTGTGCGGCA TTCCCGAAGG CTTAATCAAT
CAAATGGTTA AGATGGGCGT TAACGGTTTA ACGGCGATAT CAAACAACGC TGGCGTTGAC
GACTTTGGCC TTGGCTTACT GTTAAAACAT CGCCAAATCG CCACTATGAT CGCCTCTTAC
GTGGGCGAAA ACGCCACTTT CGAGCAACAA ATGCTCTCTG GTGAACTGAA CGTGATTTTG
ACTCCACAAG GCACATTAGC GGAAAAAATC CGCGCAGGTG GCGCAGGTAT TCCGGCATTT
TTCACTGCAA CGGGTTACGG CACGCCAGTC GCTGATGGCA AGGAAACCCG CGAAATCAAA
GGTCGCCATT ACGTGTTAGA AGAGTCGCTG ACCGCAGATT TTGCCTTAGT GCGCGCATGG
AAAGCCGATA CCATGGGTAA TTTGGTGTTC CGTAAAACCG CCGCCAACTT TAACCCTATG
ATGGCGACCG CGGGCAAAAT CACTGTGGTT GAAGCTGAGT TTATTGTTGA GCCGGGCGAG
CTAGACCCAG ATCATATCCA CACGCCGGGC ATCTATGTTG ACCGCGTTAT TCAAGGCACG
TTCGAGAAAC GTATCGAGCA GCGCACGGTA AAAGCCGCGA AATAA
|
|---|
| Protein sequence | MAGLNKVVSS YEEALNGLSN DMTIMVGGFG LCGIPEGLIN QMVKMGVNGL TAISNNAGVD
DFGLGLLLKH RQIATMIASY VGENATFEQQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF
FTATGYGTPV ADGKETREIK GRHYVLEESL TADFALVRAW KADTMGNLVF RKTAANFNPM
MATAGKITVV EAEFIVEPGE LDPDHIHTPG IYVDRVIQGT FEKRIEQRTV KAAK
|
|---|
| |