Gene Shew185_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2846 
Symbol 
ID5370064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3413244 
End bp3414413 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content52% 
IMG OID640831090 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001367043 
Protein GI153001362 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCTC TCTACACAAG TCTGAATTTT GGCCTAGGCG AAGACGTCGA CATGCTGCGC 
GATGCGGTGC AGGATTTTGC CGCGAATGAA ATCGCTCCAA TTGCCGCGAA AGTGGATCAC
GACAACGCCT TCCCCAATGA ACTTTGGCCT GTGCTAGGAG GAATGGGACT GCTCGGCGTA
ACCGTACCCG AAGAGTTTGG CGGCGCGAAC ATGGGCTACC TTGCCCACGT CGTGGCGATG
GAAGAAATCT CCCGTGCATC GGCCTCTATC GGCCTAAGTT ATGGCGCCCA CTCAAACCTG
TGTGTCAATC AAATCAACCG TAACGGTAAT GCCGCGCAAA AAGCCAAGTA TCTGCCAAAA
CTGGTGAGTG GTGAACATAT TGGCGCACTC GCCATGAGTG AGCCAAACGC AGGTTCTGAC
GTAGTTTCAA TGAAACTACA CGCCCGTAAA GAAGGCGACC GTTTCATCTT AAACGGCAAC
AAGATGTGGA TCACCAACGG CCCCGATGCA CACACCTATG TGATTTACGC CAAAACTGAC
TTAACCAAAG GTGCACACGG TATTACCGCC TTTATCGTTG AGCGTGATTC GAAAGGTTTT
AGCCAAGCGC AAAAACTCGA CAAACTCGGC ATGCGCGGCT CTAACACCTG CGAATTAGTG
TTTGAAGATG TGGAAGTGCC AGAAGAAAAC ATTTTAGGTG GCCTCAACAA CGGCGTTAAA
GTGCTGATGA GCGGCCTAGA TTACGAGCGC GTCGTGCTAT CTGGCGGCCC GCTGGGGATC
ATGAACGCCT GCATGGATAT CGTTGTACCT TACATCCACG AGCGCGAACA ATTTGGCAAA
TCGATTGGTG AATTCCAACT GGTACAAGGC AAGTTAGCCG ACATGTACAC CGGCATGAAT
GCCGCCAAAT CCTACGTGTA TGCCGTAGCA AAATCCTGCG ATCGCGGTGA AACCACCCGT
AAAGACGCCG CGGGCGCCAT TCTGTATAGC GCAGAACTCG CCACCAAAAT GGCACTGGAT
GCAATCCAAC TGCTCGGCGG CAATGGTTAT GTTAACGAAT ACGCCACCGG CCGCTTACTG
CGTGATGCCA AGCTGTATGA AATCGGCGCG GGTACCTCTG AAATTCGCCG CATGCTGATT
GGCCGCGAAC TGTTCAATGA GTCGAAATAA
 
Protein sequence
MNSLYTSLNF GLGEDVDMLR DAVQDFAANE IAPIAAKVDH DNAFPNELWP VLGGMGLLGV 
TVPEEFGGAN MGYLAHVVAM EEISRASASI GLSYGAHSNL CVNQINRNGN AAQKAKYLPK
LVSGEHIGAL AMSEPNAGSD VVSMKLHARK EGDRFILNGN KMWITNGPDA HTYVIYAKTD
LTKGAHGITA FIVERDSKGF SQAQKLDKLG MRGSNTCELV FEDVEVPEEN ILGGLNNGVK
VLMSGLDYER VVLSGGPLGI MNACMDIVVP YIHEREQFGK SIGEFQLVQG KLADMYTGMN
AAKSYVYAVA KSCDRGETTR KDAAGAILYS AELATKMALD AIQLLGGNGY VNEYATGRLL
RDAKLYEIGA GTSEIRRMLI GRELFNESK