Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2837 |
Symbol | |
ID | 5370464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3403112 |
End bp | 3404050 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831081 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001367034 |
Protein GI | 153001353 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.214873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTTCG ATAATAAGGT GGCGTTAGTC ACTGGGGCGG GAGCAGGGCT AGGTCGAGCC TATGCCATCA TGTTGGCTGA GCGGGGCGCG AAGGTGGTGC TCGTTGATCA GCCGTTATCG TCATCCGAGT CTATTTCTAC CTATGGTGCT CAAACAATTC CGGCCAACTT AGCATTGATG CAAACCTACT GCAGCATTAT TAAACTCGGC GGTGACTGTC TCTACTTTGT GCTTGATGTT AGCCAGCGGG GTGAAGTAAA CCGCATGGTC GAAGAGGTGA TCCTACGTTG GCATCGCATT GATATCTTGA TTAATAACGC GGGGGTCTAC GGTGCTTGTC CGTTCGAGCA CATTAAGCTT GAGCAGTGGC AACGGCAATT GGATGTCGAT CTCAATGGCA GTTTTTATCT GACGCAAGCC GTTTGGCCCT ATATGCAACA ACAGGATTAT GGTCGGATCA TGATGACGAC GGGAGCTTCG GCCTTATTTG GTGATTTGCA TCAAGTCGGT TTCAGCGCGA GTAAAATGGC GCTGGTGGGC ATGGTGAATT GCTTATCGAT AGAAGGAGAA ATTTATAATA TTCGCGTCAA TAGTTTATGC CCGCAGGCCG TCACAGCGAT GACCGCCAAA CATTTAGCAA GTGCGATTCA GCCGTTATTT TCCTTTGAGT CATTAACCGC CACAACGGCT TTTTTGGTGA GTGAACAGGC GCCCAATGGT CAACACTTGC TCGCAGGTGC GGGCAGCGTC AGCCATGGCA TGTTTGTCGA GTTTCAGCCG ATGTATTTTA ATGAGGGGCT TTTTACGCCG GATAATCTTG CGCAGCAGTG GCCACTGCTA TACCAATCCT TTCCTGTCAC TTTGCACTCC AGTGGTGAGG ATAAAGTCTT GTCTTGGTCT CAGTTAAGCG CGCTAGAACA CCATATTAAA ATTGATTGA
|
Protein sequence | MRFDNKVALV TGAGAGLGRA YAIMLAERGA KVVLVDQPLS SSESISTYGA QTIPANLALM QTYCSIIKLG GDCLYFVLDV SQRGEVNRMV EEVILRWHRI DILINNAGVY GACPFEHIKL EQWQRQLDVD LNGSFYLTQA VWPYMQQQDY GRIMMTTGAS ALFGDLHQVG FSASKMALVG MVNCLSIEGE IYNIRVNSLC PQAVTAMTAK HLASAIQPLF SFESLTATTA FLVSEQAPNG QHLLAGAGSV SHGMFVEFQP MYFNEGLFTP DNLAQQWPLL YQSFPVTLHS SGEDKVLSWS QLSALEHHIK ID
|
| |