Gene Shew185_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2828 
Symbol 
ID5371107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3391081 
End bp3392460 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content50% 
IMG OID640831072 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001367025 
Protein GI153001344 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTGC CCAATTCCAT CCAAGATTAT TCTGTTCTCA TCATCGACGA TGAGCCGCAC 
ATAGGCACAG TTCTCGTTCA GCTATTTGAA CTTGAGGGCA TTAAGGCGCT CGCCACCACA
GAGCCTAAAG GGATTGCTAA ACTCCTGCAT AAGGATTGGG CGGGAATGGT GATATCGGAT
GTCAACATGC CGCAATTAGA TGGCATCAGC TTAATGCAAC AAATCCGCCT GCAGGACCCC
GACCTCCCCG TTGTGTTATT GACAGGTTTT GGGGATATCG CCATGGCAGT CAATGCCCTA
AAGCAAGGCG CCTACGACTT TCTCGAAAAA CCCTTTAATA ACGAGCATAT ACTCGATGTG
GTCAAGCGCG CCTTAGATAA ACGCGGCCTG ACCCTAGAGA ACCGTAAGCT TAAAAAGGAT
CTCGAAAGTC AGAGCGTACC GGGCCCTCGC ATTTTGGGTA ACAGCGTCGG CATCAACCGT
ATGCGCCACA TCATAGATCA AGTGATAGAC ACCCCAGCTG ATGTGTTAAT CGAAGGCGAA
ACGGGCACAG GTAAAGAGCT CGTCGCCCGC TATTTACACG ATCACAGCAG CCGCAGCCAA
GCCAACTTTG TCGCTATCAA CTGTGGTGCG ATCCCCGAGA ACTTAATTGA AAGTGAGCTC
TTTGGCGCCG AAGCAGGTGC CTTTACCGGT GTCGATAAGA TGCGCATTGG TAAGTTTGAA
TACGCCAACG GCGGCACATT ATTTTTAGAT GAAATTGAAA GTACGCCACT GTCGCTGCAA
GTAAAGCTGC TGCGGGTACT TGAAGATCGT AAAGTTGAAC GCTTAGGATC AAACAAAAGC
ATCAGCCTTG ATATACGGGT AATTGCCGCC ACTAAAGTAG ATTTAAAAAG CCTGTGTGAC
ACGGGGGAGT TTCGCCAAGA CTTGTTGTAT CGCTTAAATC TGGTGACTGT GCCTATCCCT
CCCCTGCGGG ATCGCCGTGA AGATATTCCT TTGCTGTTCC TGCACTTTGC CCGCGTCGCA
TCGGCACGCT ATCACAAAGC GCTTATTGCC TTAAATGCCG AGCAAAACGC CATACTCACT
TCCCACGACT GGCCGGGCAA TGTGCGTGAG TTACGTAATC TCGCCGAACG CTTTGTACTG
CTGGGCGGAG AAGCCGCCTT TGCTGGCACT TTGGGCAATA CCCCAAGCCT GCACTCGAGC
ATGTCATTAC TGCAACGAGT CGAGTTTTTT GAAAGGGTAC TGATTGAAGA AGCGCTCAGC
CACAACAAGG GCAGCATTAA GCAAACAATG GAACAGTTGG AACTGCCCCG CAAAACCCTC
TACGACAAAA TGCGTAAATA TGATTTAGAC CGCAAGCAGT ACATTAATTC CGATGACTAG
 
Protein sequence
MSVPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKALATT EPKGIAKLLH KDWAGMVISD 
VNMPQLDGIS LMQQIRLQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHILDV
VKRALDKRGL TLENRKLKKD LESQSVPGPR ILGNSVGINR MRHIIDQVID TPADVLIEGE
TGTGKELVAR YLHDHSSRSQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKMRIGKFE
YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS ISLDIRVIAA TKVDLKSLCD
TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARVA SARYHKALIA LNAEQNAILT
SHDWPGNVRE LRNLAERFVL LGGEAAFAGT LGNTPSLHSS MSLLQRVEFF ERVLIEEALS
HNKGSIKQTM EQLELPRKTL YDKMRKYDLD RKQYINSDD