Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2828 |
Symbol | |
ID | 5371107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3391081 |
End bp | 3392460 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831072 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001367025 |
Protein GI | 153001344 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTGC CCAATTCCAT CCAAGATTAT TCTGTTCTCA TCATCGACGA TGAGCCGCAC ATAGGCACAG TTCTCGTTCA GCTATTTGAA CTTGAGGGCA TTAAGGCGCT CGCCACCACA GAGCCTAAAG GGATTGCTAA ACTCCTGCAT AAGGATTGGG CGGGAATGGT GATATCGGAT GTCAACATGC CGCAATTAGA TGGCATCAGC TTAATGCAAC AAATCCGCCT GCAGGACCCC GACCTCCCCG TTGTGTTATT GACAGGTTTT GGGGATATCG CCATGGCAGT CAATGCCCTA AAGCAAGGCG CCTACGACTT TCTCGAAAAA CCCTTTAATA ACGAGCATAT ACTCGATGTG GTCAAGCGCG CCTTAGATAA ACGCGGCCTG ACCCTAGAGA ACCGTAAGCT TAAAAAGGAT CTCGAAAGTC AGAGCGTACC GGGCCCTCGC ATTTTGGGTA ACAGCGTCGG CATCAACCGT ATGCGCCACA TCATAGATCA AGTGATAGAC ACCCCAGCTG ATGTGTTAAT CGAAGGCGAA ACGGGCACAG GTAAAGAGCT CGTCGCCCGC TATTTACACG ATCACAGCAG CCGCAGCCAA GCCAACTTTG TCGCTATCAA CTGTGGTGCG ATCCCCGAGA ACTTAATTGA AAGTGAGCTC TTTGGCGCCG AAGCAGGTGC CTTTACCGGT GTCGATAAGA TGCGCATTGG TAAGTTTGAA TACGCCAACG GCGGCACATT ATTTTTAGAT GAAATTGAAA GTACGCCACT GTCGCTGCAA GTAAAGCTGC TGCGGGTACT TGAAGATCGT AAAGTTGAAC GCTTAGGATC AAACAAAAGC ATCAGCCTTG ATATACGGGT AATTGCCGCC ACTAAAGTAG ATTTAAAAAG CCTGTGTGAC ACGGGGGAGT TTCGCCAAGA CTTGTTGTAT CGCTTAAATC TGGTGACTGT GCCTATCCCT CCCCTGCGGG ATCGCCGTGA AGATATTCCT TTGCTGTTCC TGCACTTTGC CCGCGTCGCA TCGGCACGCT ATCACAAAGC GCTTATTGCC TTAAATGCCG AGCAAAACGC CATACTCACT TCCCACGACT GGCCGGGCAA TGTGCGTGAG TTACGTAATC TCGCCGAACG CTTTGTACTG CTGGGCGGAG AAGCCGCCTT TGCTGGCACT TTGGGCAATA CCCCAAGCCT GCACTCGAGC ATGTCATTAC TGCAACGAGT CGAGTTTTTT GAAAGGGTAC TGATTGAAGA AGCGCTCAGC CACAACAAGG GCAGCATTAA GCAAACAATG GAACAGTTGG AACTGCCCCG CAAAACCCTC TACGACAAAA TGCGTAAATA TGATTTAGAC CGCAAGCAGT ACATTAATTC CGATGACTAG
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Protein sequence | MSVPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKALATT EPKGIAKLLH KDWAGMVISD VNMPQLDGIS LMQQIRLQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHILDV VKRALDKRGL TLENRKLKKD LESQSVPGPR ILGNSVGINR MRHIIDQVID TPADVLIEGE TGTGKELVAR YLHDHSSRSQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKMRIGKFE YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS ISLDIRVIAA TKVDLKSLCD TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARVA SARYHKALIA LNAEQNAILT SHDWPGNVRE LRNLAERFVL LGGEAAFAGT LGNTPSLHSS MSLLQRVEFF ERVLIEEALS HNKGSIKQTM EQLELPRKTL YDKMRKYDLD RKQYINSDD
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