| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2826 |
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| Symbol | |
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| ID | 5371093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3387753 |
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| End bp | 3389150 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831070 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001367023 |
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| Protein GI | 153001342 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.922037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTG CAACCCTATT TACCGCCCTA TTAGTGTGTA TGTTTCTCGG TATGCCTATC
GCTATCGCGT TAGGTTTTTC CAGCATGCTC ACCATTTTGT TTTTCTCGAA TGACTCCTTA
GCCTCAGTGG CACTCAAACT GTATGAGTCT TCATCGGAGC ATTACACCCT ACTCGCTATC
CCCTTCTTTA TTCTGTCATC CGCCTTCCTC TCAACCGGTG GCGTCGCGAG ACGGATTATC
GATTTTGCCA TGGACAGTAT TGGACATGTC CGTGGTGGAT TAGCGATGGC ATCTGTTATG
GCCTGTATGC TGTTTGCGGC GGTTTCAGGC TCATCACCCG CAACCGTAGC GGCGATTGGT
TCAATCGTGA TTGTGGGCAT GGTTAAAGCG GGTTATCCCG AGAAGTTTGC GGCGGGGGTT
ATCACGACCT CAGGCACACT TGGTATTTTG ATCCCACCGT CCATTGTGAT GTTGGTGTAT
GCGGCAGCGA CCGAAGTGTC CGCAGCAAGA ATGTTTATGG CAGGTTTAAT CCCAGGCTTA
ATGATGGGAT TCATACTGAT GATCGTTATC TACATCGTCG CCCGCTTTAA GAACCTGCCT
TCGCGTCCTT TTCCAGGCTT TAAACAACTA GGGATTTCAA GCGCTAAAGC TTTGGGTGGA
TTAGCACTCA TCCTTATCGT ACTCGGCTCT ATCTATGGCG GCGTTGCGAG CCCGACTGAA
GCTTCGGCTG TGGCTTGTAT GTATGCGTAC TTTATTGCGG TATTTGGTTA CCGTGACATT
GGACCATTAA AAGAGGTGGC TTGGCGCAAT CAAGGTGAAA GCTTACCTAA AGCCGCCGCA
CGTAACTTAG GTCACATGTT CCTAGGGCTA ATTAAAACGC CTATCGACAA AGACATACGT
AACGTAGTGC GTGATGGTGC TAAGGTCAGT ATCATGTTGC TGTTTATCAT AGCTAACGCT
ATGTTGTTCG CGCATGTATT AACCACTGAG CGTATTCCAC ATATTATCGC TGAGCATATC
GTTAACATGG GTTTACCCGC TTGGGGCTTC CTGATCATCG TTAACTTACT GCTGCTTGCT
GCTGGTAACT TTATGGAGCC ATCGGCAATT GTACTGATTA TGGCGCCGAT CCTCTTCCCT
ATCGCGACTC ACTTAGGCAT AGATCCTATT CACTTAGGTA TCATCATGGT GGTAAACATG
GAGATAGGTA TGCTCACGCC GCCGGTGGGG CTCAACCTCT TTGTTACCGC GGGGATCACG
GGTAAGAGTA TTGGCTGGGT CATTCAATCG GTTCTGCCTT GGTTACTGCT GATGTTAGCC
TTCTTAACCT TGATCACTTA CGTGCCACAG ATTTCGCTCT TCTTACCAGA ATGGTTGGAT
TCGATGCGTG GTTATTAA
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| Protein sequence | MAIATLFTAL LVCMFLGMPI AIALGFSSML TILFFSNDSL ASVALKLYES SSEHYTLLAI
PFFILSSAFL STGGVARRII DFAMDSIGHV RGGLAMASVM ACMLFAAVSG SSPATVAAIG
SIVIVGMVKA GYPEKFAAGV ITTSGTLGIL IPPSIVMLVY AAATEVSAAR MFMAGLIPGL
MMGFILMIVI YIVARFKNLP SRPFPGFKQL GISSAKALGG LALILIVLGS IYGGVASPTE
ASAVACMYAY FIAVFGYRDI GPLKEVAWRN QGESLPKAAA RNLGHMFLGL IKTPIDKDIR
NVVRDGAKVS IMLLFIIANA MLFAHVLTTE RIPHIIAEHI VNMGLPAWGF LIIVNLLLLA
AGNFMEPSAI VLIMAPILFP IATHLGIDPI HLGIIMVVNM EIGMLTPPVG LNLFVTAGIT
GKSIGWVIQS VLPWLLLMLA FLTLITYVPQ ISLFLPEWLD SMRGY
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