| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2824 |
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| Symbol | |
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| ID | 5371298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3386018 |
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| End bp | 3387037 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640831068 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001367021 |
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| Protein GI | 153001340 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0394071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGA ATCAACAAAC TGGATTGACC CGTCCACTCA AAACCTTAGT CAAAATGCTC
GCCGTTGCCT CCGTGTTCGC AACCAGCTTT AACGTATTTG CAGAACCTAT TGAAATTAAG
TTTTCGCACG TTGTGGCAGA AAATACGCCC AAAGGCCAAA TGGCACTTAA GTTTAAAGAA
CTCGTTGAAC AACGTTTACC GGGTGAATAC AAGGTCAGTG TATTTCCTAA CTCACAGTTA
TTTGGGGATA ACAACGAGTT AGCTGCACTA CTGTTAAACG ACGTGCAATT TGTTGCGCCG
TCACTCTCAA AATTTGAACG TTACACTAAA CGCCTACAAG TATTCGATTT ACCTTTCCTC
TTCAATGATA TGGATGCGGT AAACCGTTTC CAACAAGGTG AAGCAGGTCA AACACTGCTG
AACTCTATGA CCCGTAAAGG GATTGTCGGT CTAGGTTATT TGCACAATGG CCTGAAACAG
TTCTCGGCTA ACACGCCACT TAAAAATCCA TCTGATGCAA ACGGCTTGAA GTTCCGCGTA
ATGGCATCTG ATGTTTTGGC GGCTCAGTTT GATGCTGTCG GTGCTATCCC AGTGAAAAAA
CCCTTCTCTG AAGTATTTAC CCTGCTGCAA ACCCGCGCTA TCGATGGTCA AGAAAACACG
TGGTCAAATA CTTACTCACA AAAGTTTTAT GAAGTGCAAA GCCAAATCAC TGAAAGTAAC
CACGGTGTGC TCGACTATAT GGTCGTGACC TCTGACACTT TCTGGAAAGG CTTACCCGCT
GACAAACGTA AGATCATCAA AGAAGCTTTA GATGAATCTA TCGCATTAGG TAACAAAATT
GCCGCTGAGA AAGATAACCA AGACAAACAG TTAATCCTAG ATTCTAAACG TTCACAGTTA
GTGACTTTAA CGCCTGCTGA ACGTCAAAAA TGGGTCGATG TGATGAAACC AGTTTGGGCT
AAGTTTGAAG AGCAAATCGG TAAAGATGTG ATTGATGCTG CTGTAGCTGC AAATAAATAA
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| Protein sequence | MTLNQQTGLT RPLKTLVKML AVASVFATSF NVFAEPIEIK FSHVVAENTP KGQMALKFKE
LVEQRLPGEY KVSVFPNSQL FGDNNELAAL LLNDVQFVAP SLSKFERYTK RLQVFDLPFL
FNDMDAVNRF QQGEAGQTLL NSMTRKGIVG LGYLHNGLKQ FSANTPLKNP SDANGLKFRV
MASDVLAAQF DAVGAIPVKK PFSEVFTLLQ TRAIDGQENT WSNTYSQKFY EVQSQITESN
HGVLDYMVVT SDTFWKGLPA DKRKIIKEAL DESIALGNKI AAEKDNQDKQ LILDSKRSQL
VTLTPAERQK WVDVMKPVWA KFEEQIGKDV IDAAVAANK
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