Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2820 |
Symbol | |
ID | 5371859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3376137 |
End bp | 3377834 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831048 |
Product | alcohol dehydrogenase |
Protein accession | YP_001367017 |
Protein GI | 153001336 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [COG2169] Adenosine deaminase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACAG ATAGAGCGTC TGAGAGTGCG ATTAAGCGTG ATGAAATAGA CTCAGTGCAT GCACTGGAAT CCAGTGCGGG GCTACTTTCT GCGTCTATTT GCCGTGAGGC GAGGATGAGC CGCGATCCGC GTTTTGATGG TAAGTTTTTT GTGGGCGTAT TAACGACGGG CATTTATTGC CGTACCGTGT GTCCCGCCGT CGCGCCAAAA GAGCAAAATG TGCGTTATTT TGATTCGGCC GTGAAAGCCG CACAGGCGGG ATTACGCCCG TGTTTGCGTT GTCGGCCCGA CAGTGCGCCA GGTTCAAATC CGTGGAAAGG CACTGGCACA ACGTTGGCGA GGGCCATTAG TTTAATTGAA GCGGGTGCCT TAGCGGGGAA ATCATCGGGA GAGCCAGCGT CGACTGTGAC GCAATTGGCT GACAGATTAG GGATCAGTAG TCGTTATCTC AATAAGCTAT TTACCGAAGG CTTTGGCACT TCGCCTAAAC AATATGCCTT ATACAGGCAG TTACTGTTTG CAAAACAACT GCTACATCAA ACCCAATTAC CTATCACCCA AGTCGCGCTG GCGGCGGGTT TCAATAGTAT TCGCCGTTTC AATGAGGCAT TTAAGCAAAC CTTACAGTTG ACGCCAACGC AATTAAGAAA GACCGCGTTA ACCAAGGCGG TAAAGGAGCA GGATATTGAT TCATCAACAG GATTCGGTGA AATTGGTACT TTGGGTGAAT TTGTGCCGCA CTATGGATTA ACCCTATATC AATACTATCG ACCCCCATTG GATTGGGCAT CGCAGCTGGC ATTTTATCGC TTACGTGCGG TGACAGGGAT GGAATGGTTC ACGCCGCAAG TCAGTCATCC ACAAGCGAGC GATGCAGTTC AGATTGCAGA TGAAACGAAC CTTGCCGCTG AAGCCAAAGC TGACGATAAC GGGCTCGAAT ATGGTCGCTG TTTTGCCATC GGCAAGATGC GCGGCACAGT GCAAATTATC CATGAGCCTA AGCTGAATCG CTTCAAACTT GCGATTGCTT TGACCGAAGA TTCCGCCGTT GATGAGCTGC AATTGCTGGT CACTGAGGTG CGACGCATTT TAGATCTCGA TGCGGATATG CAGCAGATTG AGCAAGGTTT AAGTACGCTA CCGAGTTTAG GTTTAATGCC GTTTTCGGGA TTGCGCATTC CTGGCGCAGG ATCTTTGTTT GAAGCGGTTT GCCGCGCGAT CTTGGGTCAG CAAGTGACAG TAGTGCAGGC GACTAAGTTA CTGAATATAT TGGTTGAAGC CTATGGCGAG CGTTTTAGTC TCAATGGCCG TGAGTATCGA TTATTCCCAA CACCCGAGGC GATTCGTGTG GCAGGTTTAA CTGAGCTTAA AATGCCGGGC GCCCGTAAAT TAGCCCTCAA TGCGCTCGCG GCGTTTATCT GCGAACATCC TGAGGCGAGC GTCGATGATT GGCTTAGCGT TAAAGGCATA GGTCCTTGGA CGATAGCGTA TGCCAAGCTT CGTGGCTTGG GCGATCCAAA CGTGTTTTTG CATTCGGATT TGATTGTTAA AAAGCATTTA TTGGCCTTAT ATATCAAGAA CAATAAGTTA GATGAAACGG CAGCCGCGGT AGTGAGCTAT CCCCAATTGT GCGATCAGCT GAGTCAACAA ATTGCCCCGT GGGGCAGTTA CTTAACCTTT CAGCTCTGGC ATCAATAA
|
Protein sequence | MSTDRASESA IKRDEIDSVH ALESSAGLLS ASICREARMS RDPRFDGKFF VGVLTTGIYC RTVCPAVAPK EQNVRYFDSA VKAAQAGLRP CLRCRPDSAP GSNPWKGTGT TLARAISLIE AGALAGKSSG EPASTVTQLA DRLGISSRYL NKLFTEGFGT SPKQYALYRQ LLFAKQLLHQ TQLPITQVAL AAGFNSIRRF NEAFKQTLQL TPTQLRKTAL TKAVKEQDID SSTGFGEIGT LGEFVPHYGL TLYQYYRPPL DWASQLAFYR LRAVTGMEWF TPQVSHPQAS DAVQIADETN LAAEAKADDN GLEYGRCFAI GKMRGTVQII HEPKLNRFKL AIALTEDSAV DELQLLVTEV RRILDLDADM QQIEQGLSTL PSLGLMPFSG LRIPGAGSLF EAVCRAILGQ QVTVVQATKL LNILVEAYGE RFSLNGREYR LFPTPEAIRV AGLTELKMPG ARKLALNALA AFICEHPEAS VDDWLSVKGI GPWTIAYAKL RGLGDPNVFL HSDLIVKKHL LALYIKNNKL DETAAAVVSY PQLCDQLSQQ IAPWGSYLTF QLWHQ
|
| |