| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2813 |
|---|
| Symbol | |
|---|
| ID | 5369777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3368983 |
|---|
| End bp | 3370362 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640831041 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001367010 |
|---|
| Protein GI | 153001329 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.625647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAACA TTCATCGTCG TAATTTTCTT AAGGCCGCAG GTGCCGCCAC CGCAGGACTC
GTTACTGCCA ATATTGCTCT CAGTGCCTAC GCCAGTAGCG TCGCCCCTAA ACCGCAAGCC
GGTAAATCCG TTATCGGACT CATAGCACCT AAGATGGACG TGGTTCGAGT CGGCTTTATC
GGTGTTGGCG AGCGGGGGTT TAGCCATGTC GAGCAATTCT GTCATTTAGA AGGCGTTGAA
CTCAAAGCCA TTTGTGATAC CCATCAAGCG GTACTCGACA GAGCCGTAGA TCATATCGTT
AAACAAAATC GACCAAAACC GGCTGTCTAT ACAGGTAATG ATCTGAGCTA TCGCGATTTG
CTGAGCCGTG ATGATATCGA TATTGTGATT ATTTCGACCC CGTGGGAATG GCACGCGCCT
ATGGCAATCG AAACCATGGA GAGCGGCAAA CATGCCTTTG TTGAGGTGCC AATGGCGCTC
ACGGTTGAGG AGTGCTGGCA AGTTGTCGAT ACCGCTGAGC GCACTCAGAA AAACTGCATG
ATGATGGAGA ACGTCAACTA CGGCCGCGAA GAACTGATGG TGCTCAACAT GGTGCGCCAA
GGCGTGTTTG GTGAGCTACT CCACGGCGAA GCCGCTTATA TCCACGAACT ACGCTGGCAG
ATGAAGGAAA TCGACCATAA GACAGGCTCA TGGCGGACTT ACTGGCATAC CAAACGTAAC
GGCAACTTAT ACCCAACCCA CGGTTTAGGG CCTGTGTCCC AGTATATGAA CATTAACCGC
GGTGACCGAT TTGATTATCT GACCTCGATG AGTTCCCCCG CCCTTGGCCG TGCGCTCTAT
GCTAAACGTG AATTCCCCGC CGATCATGAG CGTAATCAAC TCAAGTACAT CAATGGGGAT
ATCAACACTA GCCTGATTAA AACCGTTAAG GGCCGAACCA TCATGGTCCA GCATGACACG
ACGACCCCAA GACCTTACAG TCGCCACAAT TTGATCCAAG GGACAAATGG CGTGTTTGCC
GGCTTCCCGA ATCGGATCGC CGTCGAAAAT GGTGGCTTTG GTCAAAGTTA CCACGAGTGG
GATATGGACA TGCAAAAGTG GTACGACAAA TACGATCACC CACTGTGGCA GCGCATAGGA
AAAGAGGCTG AAATTAACGG CGGCCACGGC GGCATGGACT TTGTGATGCT ATGGCGCATG
ATTTATTGCC TACGCAATGG TGAGACTTTA GATCAGGATG TGTACGATGG TGCATCTTGG
TCGGTGGTGA ATATCTTAAG TGAACATTCA CTCAATGACC GCAGTAACTC AGTCACCTTC
CCTGATTTTA CCCGCGGTGC GTGGCAAACC GCCAAACCAT TAGGGATTAT CGGCGCTTAA
|
|---|
| Protein sequence | MHNIHRRNFL KAAGAATAGL VTANIALSAY ASSVAPKPQA GKSVIGLIAP KMDVVRVGFI
GVGERGFSHV EQFCHLEGVE LKAICDTHQA VLDRAVDHIV KQNRPKPAVY TGNDLSYRDL
LSRDDIDIVI ISTPWEWHAP MAIETMESGK HAFVEVPMAL TVEECWQVVD TAERTQKNCM
MMENVNYGRE ELMVLNMVRQ GVFGELLHGE AAYIHELRWQ MKEIDHKTGS WRTYWHTKRN
GNLYPTHGLG PVSQYMNINR GDRFDYLTSM SSPALGRALY AKREFPADHE RNQLKYINGD
INTSLIKTVK GRTIMVQHDT TTPRPYSRHN LIQGTNGVFA GFPNRIAVEN GGFGQSYHEW
DMDMQKWYDK YDHPLWQRIG KEAEINGGHG GMDFVMLWRM IYCLRNGETL DQDVYDGASW
SVVNILSEHS LNDRSNSVTF PDFTRGAWQT AKPLGIIGA
|
|---|
| |