| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2794 |
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| Symbol | |
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| ID | 5372840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3348595 |
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| End bp | 3349608 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831022 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001366991 |
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| Protein GI | 153001310 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000190782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCAA TTTCTCGCGT TTTTTTCTTA CTGCTGGCGC TTGCTAGTAC TCAAGTTCAG
GCTGCCTCAG TCGAAACCAT CGAAGTCTTA ACTAAACCCT ACGCCAACTG GGTCACCTTA
GATGCCACCA TAGAAGCAGT AAAAGCGGCG ACTGTGTCAG CGCAAACCTC TGGTCGTATC
GTCAAACTCA ACTACGATGT TAACGATGTT GTCCCCGAGG GAGCCGCCCT ACTAGAGATA
ACCAGTAAAG AACAAGGCGC TGAACTCGCA AGCTTTGAGG CCGATTTAGC CAAAGCCAAA
GCCTTGAATG TGGAAGCACA GGCGCAATAC AAACGTTATA AAGAGTTATT CCCCCAAGGC
GCGATTTCTA AGGGCGCGAT GGATGAAGCC ACCGCCAATG CTAAGGCCAC AGAACAAGCC
GTAACCGCAG CGCAAGCACG CGTCATCAAA GCCAGCGAAT CCTTAAAATA CACTGTGGTA
TCAGCGCCTT TTAGTGGTGT AGTCACAGAG CGTTTTGTCG AACTGGGCGA AACGGTGAGC
CCAGGACAAG CACTACTTTC AGGGTTTTCC GCGAGTCAAA TGCGCGCCAT TACCCAAGTG
CCGCAGCGTT ATATCAATCA GTTGAAAAAC GCCCCCGAAT TCCTCGTCCG TTTAAGTGAT
GGCCGCGAGT TAATCTCAAA GGATCTCACT ATTTTTAGTT TTGCCGATCC CGTCAGCCAC
AGTTATCAAG TGCGAATTAA TCTGCCAGAA AATGAAGCCA ATCTTCAACC CGGCAGTTGG
GCAAAGGCTT CCTTTAAAAA TGGCGAGCGA GAAAAAATCC AACTGCCCAC CTCTGCGCTA
CTGACAATGA ACGAACTGAG CAGCGTTTAC CTTAAAAAGG GCGAAGAATT TGTACTCACC
CAAGTCCGTG TCGCTAGTCC CTTAGATGGC GAGGTCGAAG TGCTGGCGGG CCTGAAGTCG
GGCGACAAGG TTGCCGTTGA TGCCTACCAA GTGTTGCTCA ACAAAAAGCA ATAA
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| Protein sequence | MTSISRVFFL LLALASTQVQ AASVETIEVL TKPYANWVTL DATIEAVKAA TVSAQTSGRI
VKLNYDVNDV VPEGAALLEI TSKEQGAELA SFEADLAKAK ALNVEAQAQY KRYKELFPQG
AISKGAMDEA TANAKATEQA VTAAQARVIK ASESLKYTVV SAPFSGVVTE RFVELGETVS
PGQALLSGFS ASQMRAITQV PQRYINQLKN APEFLVRLSD GRELISKDLT IFSFADPVSH
SYQVRINLPE NEANLQPGSW AKASFKNGER EKIQLPTSAL LTMNELSSVY LKKGEEFVLT
QVRVASPLDG EVEVLAGLKS GDKVAVDAYQ VLLNKKQ
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