| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2791 |
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| Symbol | |
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| ID | 5372839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3345754 |
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| End bp | 3347070 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640831019 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001366988 |
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| Protein GI | 153001307 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000898305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TCAACAAGAC ACTCATTGCC GTTTCTGTCG CATTAGCAAG TACTCAAACC
TTAGCTTCAG GTTTTCAACT CAACAGTCAA TCAGCCACAG GTATGGGCCG TGCATTTGCT
GGTGATGCGG TTATTGCCGA TAACGCTTCT GTGTTATCAC GTAACCCTGC TGCTATGGCA
TTATTCGATA AAGATGCGAT CTCATTCGGC TTAACTTATG CCGATATTAC TGTTGATGTT
AAAGACGTTA ACTTTGCCGG TGGTGCCGTT GACTTAGGCA GCATCGATGA TGCGGGTAGC
TCTAAAATTA TCCCTAATAT TTTCTACATC CACCCAATCG ACGATAAGTT CGCCGTGGGC
TTTGCTGCGT TTTCTAACTT TGGTACCGGT ACCGATGCCA GCTCACTTTC AAAGAGTTTA
CCTGCAAACT CACCAGCACC TTATGATTTA CTCGGCGAAA CAGAAGTCAC AACGGTTAAC
TTTAACGCCA GCCTTTCATA CCGTATTAAT GAAATATTCA GTATCGGTGC GGGTGTGGAT
GCCATCTACG GTGAAGGTCG TTTAACCCGT AACATGGGCA CTACGCCTTT GGTTGACGTC
GACGCTGACG GCTGGGCCTT CGGTGGTATA GTGGGTGCCA CTATTGAGCT AGATAAAGAT
AACCGTTTCG GTATCAGCTA CCGTTTCAGC CCAACAGTGA ATGTTAAAGG TGATATCAAC
ACGATCAGCA CTAAAGATTT ATCTGCCGTT GGTTTAGGTT CAAAAACAAC CCTAGCGACC
AGCTTTGACA GCTTAGACGT ACCCCTTGCG GATATTTTCC AAGTTGCAGG TTTCCATCAG
CTTACTACTA AGTTTGCAGT GCACTATACA GCGCAATACA CCCAGTGGGG CAACTTTGAT
CAAATCACCG CTAAAGATGG CGTCGCCACT ATTATTCCAG GTCAAGCGGG TGCGGGTACT
CAACTGCAAG CAGGCGACGT TGCTCTGAAA GAATACCAAT GGAAAGATTC ATGGTTATTC
AGCCTAGGTG GTACTTATAC TATCAACGAA CAATTCACCG TTCGTGCAGG TTATATGCAT
GACCAAGGCG TTGTGGACGA AATTAGCTCA ATTTCATTCC CAGACTCTGA CCGTAACTGG
TATACAGCGG GTATGAGCTA CCACATCAAC CCACAAAACA CAGTTGACTT TGGTATCGCT
TATATTAAAG GTGAAAAAGT TCACCTGATC GAAAACAGCG CAATCGCTGG CCCTGTAAAT
GCAATTACTG AATCAAGCGG TATGTACTAC TCAGTTCAAT ACAGCTACCA GTTCTAA
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| Protein sequence | MKTFNKTLIA VSVALASTQT LASGFQLNSQ SATGMGRAFA GDAVIADNAS VLSRNPAAMA
LFDKDAISFG LTYADITVDV KDVNFAGGAV DLGSIDDAGS SKIIPNIFYI HPIDDKFAVG
FAAFSNFGTG TDASSLSKSL PANSPAPYDL LGETEVTTVN FNASLSYRIN EIFSIGAGVD
AIYGEGRLTR NMGTTPLVDV DADGWAFGGI VGATIELDKD NRFGISYRFS PTVNVKGDIN
TISTKDLSAV GLGSKTTLAT SFDSLDVPLA DIFQVAGFHQ LTTKFAVHYT AQYTQWGNFD
QITAKDGVAT IIPGQAGAGT QLQAGDVALK EYQWKDSWLF SLGGTYTINE QFTVRAGYMH
DQGVVDEISS ISFPDSDRNW YTAGMSYHIN PQNTVDFGIA YIKGEKVHLI ENSAIAGPVN
AITESSGMYY SVQYSYQF
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