| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2786 |
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| Symbol | |
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| ID | 5372850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3338689 |
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| End bp | 3340770 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640831014 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001366983 |
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| Protein GI | 153001302 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAC ATTTTATTCG CCCAGAATGG CTACTTGCAC TAGTGCCACT GGCTCTAGTG
TTGTTGAGTT TATGGCGACA ACACGAGAGC CACAGCGCGT GGAATAGGTA TATTGCGCCG
CATTTAGCCA AGATATTGGT CACCCAAGGC AGCAAGAAAT CCCGTCGTCC TTTGCATTTA
TTAGCTTTCA CTTGGCTGAT GGCGACTTTT GCGCTCGCCG GACCTGCCGT TAATAAACAG
TCCTTACCTG TGTTTGCCGC CGAGCAAGGC CGCGTATTGG TGATGGACAT GTCTGTGTCT
ATGTTCGCTA CCGATCTTGC ACCAAACCGG TTAACCCAAG CTAAATTTAG GGCTACGGAT
CTGCTGCGTA ATCTTAAAGA AGGTGAAACA GGTTTAGTCG CCTTTGCTGG CGATGCCTTT
ACTATCAGCC CGTTAACGCG CGATACCGGC ACGCTACTCA ATTTATTGCC GACCTTAAGC
CCTGAAATCA TGCCCGTTCG TGGCTCAAAC TTAGCGGCAG GTTTAACCCA AGCTAAAACG
CTACTGGCTC AGGGTGGGCA TATTCGCGGT GATATTATCG TGATGACAGA TGGCATAACC
GCAGCCCAAT TTGATGACGC TAACTCGGCA TTAAGTGGCA CGCAATATCG TCTTGCCGTC
GTCGCTTTTG GTACCAGCCA AGGTGCGCCA ATTCGTCTAC CCGATGGACA ATTGCAGCGC
GACAGCAGCA ACGAGGTCGT TGTGGCCAGC ACTGACTTTG GCCTGCTGCA AAAACTGGCA
GCGGATAACA AAGGCGTGTT AATCCAAAAT CGTACCGACG GCAATGATCT GGCCCAATTA
CAACATTGGT TAAGTGATAC GGGCGATGCC AAAGCCACAG ATCTTGACGG TGAAACCTGG
CAGGATCTCG GCCCTTATCT CGCCCTGCTA TTACTGCTGC CCGCCCTTTT CAGCTTTAGG
CAAGGAATCG TGGCAAGCGT TGGATTTGCC ACTCTTGCGG GCGGCTTACT GCTCGCGGCC
GCGCCTCAGT CTGCCCATGC CAGTGTGTGG GACAATGCCT GGGACAATGT GTGGAAAACG
CCAGATCAGC AAGCGATGCA GGCCTATCAA TCCCAAAATT ATGCCAACGC CGCTAAGCAG
TTTGAGTCAC CCCAATGGCG TGGCAGCGCC CAATATAAGG CCGGTGATTA TGAGCAAGCG
CTGAAAACCT TCGAGCAAGA TAGCTCAGCC CAAGGCCTCT ACAATCAAGG CAATGCGTTG
ATGCAACTCG GTAAACCCGA TAAGGCTAAG GAGCGCTATC AAGCCGCACT TGAAAAACAA
GCCGATTTCC CAGCGGCGAA GGCCAACCTT GAACTGGCTG AAAAGCAATT GAAAGAGCAG
CAAAAGCAGC AAGGTAAAAA CGATCAACAA GGCGATCAGC AGTCCGGTGA TCCCCAATCA
GGCAACCAAC AGTCTGGTGA CCAACAATCC GGTAATCAGC AGTCGCAGGA TAAACAACAA
TCTGACCAAG ATAGCGCTCA GAAAGATAAG CAAGATCAAG CGGGACAAGA GTCTCAGGAT
CAACAGGACA ATGCCAATCC TGAGCAAAGT TCTGATCAAA GCTCTGAGCA GCAAAAAGCG
GATGAGCAAC AGTCTGAGCA GGATAAGCAA AATGGCAATG CTCAGGAAAA GCAGGATGAA
GCTCAGCAAG ATCCCGTGAA AGATAAAGCG CAACAGGATC AACAAGCCAA GCAGCAAAAT
GCCGAGCAGG ATGCAAAGGA CAATTCACCT GTAGATAATG AAGCTAAGAT GCAAGCGCAG
GCTAACGCCG ATGCCGAGGA GCAAAAATCC GCTGAGCAAG CAAAGCAAAG CGTTGGCGCC
AAAGAAGCTC CAGAGCAAAA TGCGCAAGAT AAACAAGAGG CTGCTATGAG TGAATCTGTC
GAAGCGCCGC CAACCAATAG CGAACCGCTT CCCGCAGAAA TGCAGCGAGC GCTGAGGGGC
GTGAGTGAAG ACCCCCAAGT GTTACTTCGC AATAAAATGC AGTTGGAATA TCAAAAACGC
CGTCAAAATG GCCAAATATC AAAGGATAAC GAACAGTGGT GA
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| Protein sequence | MSLHFIRPEW LLALVPLALV LLSLWRQHES HSAWNRYIAP HLAKILVTQG SKKSRRPLHL
LAFTWLMATF ALAGPAVNKQ SLPVFAAEQG RVLVMDMSVS MFATDLAPNR LTQAKFRATD
LLRNLKEGET GLVAFAGDAF TISPLTRDTG TLLNLLPTLS PEIMPVRGSN LAAGLTQAKT
LLAQGGHIRG DIIVMTDGIT AAQFDDANSA LSGTQYRLAV VAFGTSQGAP IRLPDGQLQR
DSSNEVVVAS TDFGLLQKLA ADNKGVLIQN RTDGNDLAQL QHWLSDTGDA KATDLDGETW
QDLGPYLALL LLLPALFSFR QGIVASVGFA TLAGGLLLAA APQSAHASVW DNAWDNVWKT
PDQQAMQAYQ SQNYANAAKQ FESPQWRGSA QYKAGDYEQA LKTFEQDSSA QGLYNQGNAL
MQLGKPDKAK ERYQAALEKQ ADFPAAKANL ELAEKQLKEQ QKQQGKNDQQ GDQQSGDPQS
GNQQSGDQQS GNQQSQDKQQ SDQDSAQKDK QDQAGQESQD QQDNANPEQS SDQSSEQQKA
DEQQSEQDKQ NGNAQEKQDE AQQDPVKDKA QQDQQAKQQN AEQDAKDNSP VDNEAKMQAQ
ANADAEEQKS AEQAKQSVGA KEAPEQNAQD KQEAAMSESV EAPPTNSEPL PAEMQRALRG
VSEDPQVLLR NKMQLEYQKR RQNGQISKDN EQW
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