Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2781 |
Symbol | fadI |
ID | 5372872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3333510 |
End bp | 3334820 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640831009 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_001366978 |
Protein GI | 153001297 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02446] fatty oxidation complex, beta subunit FadI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGATA GACAACAGGT TACGAACGCC AAGGGCGAGC GTATCGCAAT TGTAGCGGGT TTAAGAACGC CATTTGCAAA GCAAGCCACG GCATTTCACG GTGTATCGGC GCTCGATATG GGCAAAATGG TGGTCAATGA GTTATTGGCG CGTTCTGAAC TGGACCCTAA GTTGATTGAG CAGCTGGTCT ATGGACAAGT GGTGCAAATG CCAGCTGCAC CTAACATCGC CCGTGAAATC GTACTCGGTA CTGGCATGAA TGTGTCGACC GATGCCTATA GTGTCACTCG TGCCTGTGCG ACTAGCTTCC AATCTGCCGT AAACGTGGCC GAATCTATCA TGACAGGCAA TATCGAAATC GGTATTGCGG GCGGCGCCGA CTCTTCTTCT GTATTGCCTA TCGGTGTGTC GAAAAAATTA GCCCATGCGT TAGTCGATCT GAATAAAGCC CGTAGCTTTG GGCAAAAATT ACAAATTTTC CGTCGTTTAG GCATTAAAGA TTTATTACCT GTACCGCCTG CAGTTGCCGA GTACTCAACG GGCTTGTCCA TGGGACAAAC CGCTGAGCAA ATGGCAAAAA CCTACAATAT TAGCCGCGCC GATCAAGATG CTTTAGCGCA CCGCTCGCAC ACCTTAGCGA GTGAAACTTG GGCTTCGGGC CATCTTCGTG ACGAAGTGAT GGTTGCCCAT GTGCCGCCGT ATAAACAGTT TATCGATCGC GATAACAATA TCCGCGAAAA CTCGGTACTG GAGTCATACG CTAAGCTGCG TCCTGCATTC GACAAACAGC ATGGTACTGT GACGGCGGCC AACAGCACGC CGCTTACTGA CGGTGCCTCA GCGATTATCC TGATGAGTGA AGGTCGAGCT AAAGCCTTAG GTTATCAACC GATTGGCTAC ATTAAGAGCT ATGCCTTTAG CGCCATTGAT GTGTGGCAAG ACATGCTGAT GGGGCCCTCT TACGCGACGC CACTGGCGCT GAAACGTGCT GGAATGGAGC TTGAAGATCT TACCCTGATT GAAATGCACG AAGCTTTTGC GGCGCAGACA TTAGCGAATA TGCAGATGTT TGCTTCGAAA AAATTTGCCG AAGAAAAACT CGGCCGTAAC CGCGCGATTG GTGAAATCGA CATGAGCAAG TTTAACGTGC TCGGCGGCTC GCTTGCCTAC GGCCATCCTT TTGCTGCAAC GGGAACCCGT TTGATCACGC AAGTGTGTCG TGAGCTTAAG CGCCGTGGTG GTGGAACTGG CCTAACAACA GCCTGTGCGG CTGGTGGTTT GGGCGTGGCA ATGATACTAG AAGTGGAGTA G
|
Protein sequence | MSDRQQVTNA KGERIAIVAG LRTPFAKQAT AFHGVSALDM GKMVVNELLA RSELDPKLIE QLVYGQVVQM PAAPNIAREI VLGTGMNVST DAYSVTRACA TSFQSAVNVA ESIMTGNIEI GIAGGADSSS VLPIGVSKKL AHALVDLNKA RSFGQKLQIF RRLGIKDLLP VPPAVAEYST GLSMGQTAEQ MAKTYNISRA DQDALAHRSH TLASETWASG HLRDEVMVAH VPPYKQFIDR DNNIRENSVL ESYAKLRPAF DKQHGTVTAA NSTPLTDGAS AIILMSEGRA KALGYQPIGY IKSYAFSAID VWQDMLMGPS YATPLALKRA GMELEDLTLI EMHEAFAAQT LANMQMFASK KFAEEKLGRN RAIGEIDMSK FNVLGGSLAY GHPFAATGTR LITQVCRELK RRGGGTGLTT ACAAGGLGVA MILEVE
|
| |