| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2773 |
|---|
| Symbol | |
|---|
| ID | 5372275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3321314 |
|---|
| End bp | 3324103 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640831001 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001366970 |
|---|
| Protein GI | 153001289 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.368865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAGCCT CTCAGTCCAT TTATAAAAGT CCAAACGATC ACCGCCAGTA TCGTTATCTT
GTGTTAGATA ACGCGCTTAG GGTGTTATTG GTTGAAGATC AAGATGCCAG CCAAGCGGCC
GCATCTATGG CTGTAGGCGT GGGTCATTTT GATGATCCCG CAGATAGACC CGGCATGGCG
CACTTTTTAG AGCATATGCT CTTTCTTGGT ACCGAAAAAT TTCCCGACTC AGGCGAGTAC
CACGCCTTTA TCAACCAACA TGGCGGCAGC AATAACGCTT GGACGGGCAC AGAGCACACC
AACTTCTTTT TCACCATCAA TGAAGACGTG TTTGCCGACT CCTTAGACAG ATTCAGCCAA
TTTTTTATTG CACCTAAATT TGACTTAGAA CTGGTCGACA GAGAACGCCA AGCTATTGAA
TCTGAATTTA GTTTAAAACT GAAAGACGAT ATTCGCCGTA CCTATCAAGT GCTCAAAGAG
ACAGTTAATC CGCTGCATCC TTTTTCGAAA TTTTCAGTCG GTAACTTAGT CACCTTAGGC
GGAGAGCAAG CACAGGTACG TAGCGAATTA CTCGATTTCT ATCAAAGCCA CTACAGCGCC
AACTTAATGA CCCTATGCTT AGTCGCGCCG CTTTCCCTCG ACGAATTAGA AGATTTAGCC
TGCCATTATT TTAGCGGAAT CCAAAACTTG AACTTAGTGA AAAACTATCC TCAAGTGCCG
CTGTTTTCAG AAAATGAGCT GTTAACCCAA ATTGATATCG TGCCGCTTAA GGAGCAAAAA
CGCTTAAGCA TCAGCTTTAA TTTCCCTGGC ATTGACCACT ACTACAAACG TAAGCCTTTG
ACTTATATCA GCCATATTTT AGGCAATGAG AGCCATGGCA GCCTTTTATC CTATCTTAAA
GAGCAGGGAC TTGTGAATAA CTTGTCCGCG GGCGGCGGCG TAAATGGTTA TAACTTCAAA
GATTACAGTA TCGGTTTACA GTTAACCGAT AAGGGACTGG CGAATCTTGA TGAGATTATC
AGCTGCTGTT TTGAGTATAT TGAGCTCATC AAAACCCAAG GTTTAGATGA ATGGCGTTAT
TTAGAGCGCG CAAACCTGCT CAAAATGGCA TTTCGCTATC AAGAGCAAGT CAAATCACTC
GATTTAGCCA GCCATCTCAG CATCAATATG CATCATTATG AAGTCGAAGA TTTGGTCTTT
GGTGACTATC GAATGGATGG GCTGGATATT CCAGAAACCA TAGCCCTACT CGAGCTAATG
ACGCCCCACA ATATGCGGCT GCAGCTTATC GCGCAATCGG TTAAAACGGA TCGTAAAGCC
AACTGGTACC ACACGCCCTA TAAAGTGCGC CCTATTGCGC CTCAATCACT TGCTCGTTGG
CAAGTGAGCA GTATTCGCCC TGAATTACAA TTACCTGCTG CAAACCCATT TATCGTCGCC
GACTCCATTC CTCGACCAGA TAAGAGCGAT GTCGAGGTAC CAGTGATCGT TGCAGAATCG
ACGGGATACC GTATTTGGCA CAAGAAAGAT GATGAGTTTA ATGTGCCCAA AGGCCACATG
TATTTGTCGC TGGACTCAGA GCAGGCGAGT AAAACACCAA AACATGCCGC CCTCACCCGC
CTGTATGTTG AAATGCTGCT CGATTATCTG ACTGAACCAA CCTATCAGGC CGAAGTTGCG
GGCTTAAGCT ACAATATTTA TCCGCATCAA GGTGGTATAA CCCTGCATTT ATCGGGCTTT
ACCGGTAATC AAGAAACCCT GTTGGCCTTG TTAATCCACA AAGCCAGAGA GCGTAATTTT
ACTGAAGAAC GTTTTGCCCT AATTAAATCT CAACTACTGC GCAGTTGGCA GAATCTAGCG
CAGGCTAAAC CTATTTCGCA ATTGTTTACT AGTCTGACTG TCACGCTACA AAAAAGCAGT
TATGAGCCTG CCCGCATGGC TCAAATGCTC GAAGACATAA GCCTTGAAGA TTTGCATAAC
CATGTACGCG CCTTTTACGA GAAGATCTAT CTTGAAGGAT TAGTTTATGG GGATTGGTTA
GTCTCTGAAG CGCAAGCTCT CGGTAAACGC TTAGAGCACA TTTTATCCTT GGTTTCGACG
CCAAGCGCCG AGTCCACCAG AGAGTTAGTC AATTTAACGG GCCAAGGCAC CTTACTTAGA
GAACTTGCGA TAGATCATCA AGATAGCGCG ATCATTGTGT ATTACCAATC TGCTGTGGCA
ACGCCAGAAA AGATGGCACT GTTTAGCTTA CTAAATCATA CTATGTCGTC CACCTTCTTC
CATGAACTGC GCACTGAAAA ACAGTTGGGC TACATGGTAG GCACAGGTTA TCTGCCACTC
AATCGTCATC CTGGGCTCAT TTTTTATATC CAGTCGCCTA CGACTGGACC ACTGCATTTA
TTAGAGGCGA TAGACGAGTT TATTGCAGAC TTTAATTATG CCGTGATGCA AATCACCAAC
GAAGAATGGG AAAGCACTAA GGTCGGTCTT ATTAGTCAGA TCATGGAGCA CGATGCGAAC
CTCAAAACTC GCAGCCAACG ATATTGGGTC AGTGTCGGCA ACAGAGATTA TCAATTTAAC
CAAAGAGAAC TGGTCGTAGA CGAAATCACT AAGCTCACCC GCACTGATTT ACTCAAATTC
ATGATGCGTA AAATGCGCAC CAAACACAGT GACCGCTTAG TCTTATTTAG CACGGGTGAA
CAGCACAGAA CCCAAGCGGC GTTGCAGTCA GAAAAAATGA TCACAGATCT CAAAACGTTT
AAGCAAACGG CAGAGAAGTT TAATTTCTAA
|
|---|
| Protein sequence | MQASQSIYKS PNDHRQYRYL VLDNALRVLL VEDQDASQAA ASMAVGVGHF DDPADRPGMA
HFLEHMLFLG TEKFPDSGEY HAFINQHGGS NNAWTGTEHT NFFFTINEDV FADSLDRFSQ
FFIAPKFDLE LVDRERQAIE SEFSLKLKDD IRRTYQVLKE TVNPLHPFSK FSVGNLVTLG
GEQAQVRSEL LDFYQSHYSA NLMTLCLVAP LSLDELEDLA CHYFSGIQNL NLVKNYPQVP
LFSENELLTQ IDIVPLKEQK RLSISFNFPG IDHYYKRKPL TYISHILGNE SHGSLLSYLK
EQGLVNNLSA GGGVNGYNFK DYSIGLQLTD KGLANLDEII SCCFEYIELI KTQGLDEWRY
LERANLLKMA FRYQEQVKSL DLASHLSINM HHYEVEDLVF GDYRMDGLDI PETIALLELM
TPHNMRLQLI AQSVKTDRKA NWYHTPYKVR PIAPQSLARW QVSSIRPELQ LPAANPFIVA
DSIPRPDKSD VEVPVIVAES TGYRIWHKKD DEFNVPKGHM YLSLDSEQAS KTPKHAALTR
LYVEMLLDYL TEPTYQAEVA GLSYNIYPHQ GGITLHLSGF TGNQETLLAL LIHKARERNF
TEERFALIKS QLLRSWQNLA QAKPISQLFT SLTVTLQKSS YEPARMAQML EDISLEDLHN
HVRAFYEKIY LEGLVYGDWL VSEAQALGKR LEHILSLVST PSAESTRELV NLTGQGTLLR
ELAIDHQDSA IIVYYQSAVA TPEKMALFSL LNHTMSSTFF HELRTEKQLG YMVGTGYLPL
NRHPGLIFYI QSPTTGPLHL LEAIDEFIAD FNYAVMQITN EEWESTKVGL ISQIMEHDAN
LKTRSQRYWV SVGNRDYQFN QRELVVDEIT KLTRTDLLKF MMRKMRTKHS DRLVLFSTGE
QHRTQAALQS EKMITDLKTF KQTAEKFNF
|
|---|
| |