Gene Shew185_2768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2768 
Symbol 
ID5370035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3316531 
End bp3317706 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content50% 
IMG OID640830996 
Productmajor facilitator transporter 
Protein accessionYP_001366965 
Protein GI153001284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0162365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTT CTTCTAGCAC AAGCCGGCAA TTACGCTGGC TTTGTGCCTG CTATTTTTTC 
TTCTTTTCTA TTCTTGGTAC TATGGTCCCT TATCTTGGGG TCTTCTTCGA AAATCGCGGT
TTTAATCCTC AAGAAATTGG CTTTTTACTC GCCATCCTGA TGGCGACGCG TATCGTTGCC
CCGAATGTGT GGGCCAAAGT GGCTGACCGA ACTGGGATGC GTGCCGAGCT TATCAAAATG
GGCGCGGGAG CCGCCGCGCT GGCGTATTTG AGTTTCTTCT ACCATGGCGG TTTTGTGTAT
ATGGCGCTGA GTCTGGCCCT CTATACCTTC TTTTGGAATG CGATCCTCGC CCAGCTTGAA
GTGATCACCT TAGAAACCTT AGGCGAGAAT GCCAGCCGCT ACGGTCAAAT TCGCAGTTGG
GGCAGTGTCG GTTATATCTG CCTAGTTGTC GGTGCGGGCT TTGCGATTGG TCAGTGGGGC
ACTGAAGTGC TGCCTTATAT TGGTTTCTCA TTATTTATTG GTATGTTAGC CAGTGCGTTG
CCATTACCAG CAAATCGCTT AGTGCGTGAC ACCAGTCAAG TGCGGCCACC ATTACAATGG
AATCGGGCAA TTATTTGGTT CTTACTCTCG GCGATGTTGC TGCAAATGAG CGCAGGGCCT
TTCTACGGCT TCTTCGTCTT ATATTTAAAA CAAGCGGGTT ACTCAGAATC TTCAGCGGGG
ATATTTGTCG CCCTTGGCGC TATGGCCGAA ATCGTAATGT TTATGTTCGC GCCGCGTTTA
CTGGGTCGCT ATGGCGTTAA CACCCTATTG ATAGTCAGTA TCGGTATGAC TTGCTTGCGT
TGGTTGTTGG TCGCCTTTGG GGTGGACAGC GTATTGTGGC TTGGTTTTAG CCAGTTATTA
CATGCCTTTA CCTTTGGCTT AACTCACGCG GCATCGATTC AATTTGTGCA CAGGCATTTC
GATGCGAGTC ACAGAAGCCA AGGTCAAGCC CTATACGCCA GCTTAAGTTT TGGGGTTGGC
GGCGCGCTCG GTACTTGGGT TTGCGGCTAT ATTTGGGGCG ATGGTAGCGG GGCGGTTTGG
TCTTGGGTAT TTGCAGCCGG ATGCGCCTTT GCCGCTATGC TGGCGGTATT CTTTATTCCT
AGGGATAAAC CTGGCGTTGC CTCCCATACG GCCTAG
 
Protein sequence
MSTSSSTSRQ LRWLCACYFF FFSILGTMVP YLGVFFENRG FNPQEIGFLL AILMATRIVA 
PNVWAKVADR TGMRAELIKM GAGAAALAYL SFFYHGGFVY MALSLALYTF FWNAILAQLE
VITLETLGEN ASRYGQIRSW GSVGYICLVV GAGFAIGQWG TEVLPYIGFS LFIGMLASAL
PLPANRLVRD TSQVRPPLQW NRAIIWFLLS AMLLQMSAGP FYGFFVLYLK QAGYSESSAG
IFVALGAMAE IVMFMFAPRL LGRYGVNTLL IVSIGMTCLR WLLVAFGVDS VLWLGFSQLL
HAFTFGLTHA ASIQFVHRHF DASHRSQGQA LYASLSFGVG GALGTWVCGY IWGDGSGAVW
SWVFAAGCAF AAMLAVFFIP RDKPGVASHT A