| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2764 |
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| Symbol | |
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| ID | 5371169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3312119 |
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| End bp | 3314176 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830992 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001366961 |
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| Protein GI | 153001280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00507569 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGCTG AGCCCAATAA ACCTTGCCAA ATTAAGCGTG ATTACCCGCA ATTAATCAAC
CTTTATCCCG CAACCGCTGA CACTGATGCA CACTATCTCA GCAAGTTGAG CATTTATCAG
CAGCGGGTAT TTGAGGCTCA TTCACAGCAA AAACTCTTAG TATTAGGCCA AATTGGTCTA
AGCAACGGGC TTGAACTCTT ATCTTGGTGG CGCGCTCATT CGCACCTTAG CCAACGTTTA
CTCTTAAAAG TGTTCGAACC CAATCCGATT AATGCTTACG AACTTAAATT ACTTTGGGAT
CAATCCGCCT GTTTAACCAA AGAGCCTGAA CTTGAGCCAC TTGCCCAACG CTTACTTCAT
GCAGAGCCTG CGGCTATTAT AGGTTGCCAG AGATTAATTT TTGATGACGG TCGTTTCACA
ATCGACCTGC ACTTTGGTGA TATTCAATCC CAGCTCAGTT CACTCATCCA TTCGCCAATG
CATCCGGTTC AACACTGGTT GATATTGCCC CATCTGCTAC AGGCGCTACA TCATCAAAGC
CACTGGCAGA TGGCAAAACT CAGTGACGAT AGCGCGACCA TTGCCACTAT TGGATTAAGC
GAATCAAGCG GATTAAGTGA AACAACAGTC AACCGTTTCC AAGCCTGTGG CTTTACTGTG
AGCGATATCA ATGAGCTGGG TATCCATCAG CCAGTCACAT TGATTAATCA CCAACCTGAC
GCCGTACTGC TACACGAGCG CCAAGTCTTA CGTCAGCAAG ACGCTAAAGC CTATGCTTTT
AATCCTATGG CTGCAATCTT ATCCTCGGCG ACGCAAAGCT CAATTGCCAT CATAGGCGGC
GGCTTAGCCT CGGCGCATTT GGCGCTGTCT TTGGCTGAGC GCGGCCAAGG TGCACAGGTA
TTTTGTAAAG ATGCCGAACT AGGCCAAGGC GCATCGGGCA ATCGCCAAGG AGCCATTTAT
CCGCTGCTGA CCCCAGAAAA TGACGAGCTG AGCCGCTTTT TCCAACAAGC ATTTTTATTT
AGCCGACGTC GAGTGCAGGC GCTGACATCC GCCCCCGCCG ATAATCAGAC GCCGATTTCC
CATGTTTTTT GCGGCGTATT GCAAACCGCC CACGATGAAC GCAGCCAATT ACGACTCGAT
AAAATCATTC AAGGCCAACC CTGGCCAAGT GAAATCGCCT ACGCCGTTGA TGCTGAGCAA
GCCAATGCCA TTGCCAAGAT CAATCTCGAT AAGCCAGGCT TTTTTTATCC CTTAGGTGGC
TGGGTTTGCC CATTTGAATA TGCCGACGCT GCGATACAAA AAGCGATGCA ACTGGCCGAT
GTCAGTGTCT CGCTCAATAC TGACATCCTT GCCATTGAAC GCCAAAGCGA TGGCTGGGTT
TTATTAACTG AAAAGGAACG TCTCGGGCCC TTTGCGCAAC TTGTACTCGC CAATGGCGCA
GAATTGACAC AATTTGATGC CAGCAACAAA TTACAAATTA GCCCCTTTCG CGGCCAAGTC
AGCCATGTGC CCGCACAATT TCAATTGAGT CAGCTCGCAA CTGTACTGTG CGCCAACGGT
TATTTAACGC CAAGTCACCA AGGGCTCCAC TGCCTAGGCG CGAGTTACGT TAAAGAACCT
AAGCATTTAG ATTTTTGCCC GCAGGAGCAA CAGGAAAACC TCGCCAAAAT GCACGAGAGT
TATCCGAAGC AAAGCTGGCT TGAAGATATC GACATGAGTG GCAACAATGC CCGTGTTGGC
GTGCGTATGG TGACGCGGGA TCATTTCCCT ATGATGGGCT GCGCGCCCGA TGTACCAAAA
ATTATTAAAG ATTATGCGCA ACATCAACTC ACTAAAGAAA GTCGCCACTA CTGGCAAACC
ACGCCAGCGC CAGTGCATCA AGGACTGTAT ATTCTTGGTG GGTTAGGCTC GCGGGGGTTA
AGTTCTGGGC CACTGGCCGC CGAATGTCTC GCCGCGCAAC TTTGCGGCGA ACCAATACCG
CTCGACAAAG CAACCCTGTG TAAACTCAAC CCCAATCGCA TGTGGCTGCG AAAATTGCTC
AAGGGTAAAG CGCTCTAG
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| Protein sequence | MTAEPNKPCQ IKRDYPQLIN LYPATADTDA HYLSKLSIYQ QRVFEAHSQQ KLLVLGQIGL
SNGLELLSWW RAHSHLSQRL LLKVFEPNPI NAYELKLLWD QSACLTKEPE LEPLAQRLLH
AEPAAIIGCQ RLIFDDGRFT IDLHFGDIQS QLSSLIHSPM HPVQHWLILP HLLQALHHQS
HWQMAKLSDD SATIATIGLS ESSGLSETTV NRFQACGFTV SDINELGIHQ PVTLINHQPD
AVLLHERQVL RQQDAKAYAF NPMAAILSSA TQSSIAIIGG GLASAHLALS LAERGQGAQV
FCKDAELGQG ASGNRQGAIY PLLTPENDEL SRFFQQAFLF SRRRVQALTS APADNQTPIS
HVFCGVLQTA HDERSQLRLD KIIQGQPWPS EIAYAVDAEQ ANAIAKINLD KPGFFYPLGG
WVCPFEYADA AIQKAMQLAD VSVSLNTDIL AIERQSDGWV LLTEKERLGP FAQLVLANGA
ELTQFDASNK LQISPFRGQV SHVPAQFQLS QLATVLCANG YLTPSHQGLH CLGASYVKEP
KHLDFCPQEQ QENLAKMHES YPKQSWLEDI DMSGNNARVG VRMVTRDHFP MMGCAPDVPK
IIKDYAQHQL TKESRHYWQT TPAPVHQGLY ILGGLGSRGL SSGPLAAECL AAQLCGEPIP
LDKATLCKLN PNRMWLRKLL KGKAL
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