| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2759 |
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| Symbol | truA |
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| ID | 5371739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3303961 |
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| End bp | 3304746 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830987 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001366956 |
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| Protein GI | 153001275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00729091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGATTG CATTAGGTAT TGAATATGAC GGCAATGGTT ATTTTGGCTG GCAACGTCAG
GCCGAAGTCG ATTCAGTACA AGGGCAATTA GAACGGGCGT TATCGATAGT GGCTAATGAG
CCTATCGGCG TCTTCTGCGC TGGTCGTACC GATGCGGGCG TGCATGCCAC AGGCCAAGTG
GTTCATTTTG AAACCAATGC CATTCGTAAT GAAGGCGCAT GGACCTTAGG GGTGAATGCT
AATTTGCCCG ACAATATTGC GGTGCGTTGG GTTAAAGAAG TCGACGACAG TTTTCACGCG
CGCTTTTCGG CTACCGCCAG ACGCTACCGT TATGTGATTT ACAATCACAG TTTTCGCCCT
GGGATTTTAC GCCATGGTGT CAGCCATTAT CACGGCGATA TTGATGCCGA TAGAATGCAC
CAAGCGGCGC AGGCACTCTT AGGCGAGCAA GATTTTACCA GCTTTCGCGC AGTCCAGTGC
CAGTCAAAAA CGCCGTTTCG TAATGTACAT TGCGTCAATG TCACGCGCCA AGGCATGTAT
GTGATTGTTG ATATTGCCGC CAACGCCTTT TTACATCACA TGGTGCGCAA TATCGTCGGT
TCATTATTAG AAATCGGTTT AGGCAATCAG CCGCTGACGT GGATGGGTGA TTTGCTCGCG
TTAAAAGACA GAAACCAAGC CGCAGCGACG GCTAAACCTC ATGGGCTTTA TTTAGTTGAT
GTGACTTATC CAGAACAATA TCAATTGCCT AAGCTCGCCC TTGGGCCATT ATTCATGTTG
GATTGA
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| Protein sequence | MRIALGIEYD GNGYFGWQRQ AEVDSVQGQL ERALSIVANE PIGVFCAGRT DAGVHATGQV
VHFETNAIRN EGAWTLGVNA NLPDNIAVRW VKEVDDSFHA RFSATARRYR YVIYNHSFRP
GILRHGVSHY HGDIDADRMH QAAQALLGEQ DFTSFRAVQC QSKTPFRNVH CVNVTRQGMY
VIVDIAANAF LHHMVRNIVG SLLEIGLGNQ PLTWMGDLLA LKDRNQAAAT AKPHGLYLVD
VTYPEQYQLP KLALGPLFML D
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