Gene Shew185_2750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2750 
Symbol 
ID5371083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3292472 
End bp3294211 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content46% 
IMG OID640830978 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001366947 
Protein GI153001266 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AAACGATGAT GAGTGTGGTA TTTTCGACCA TAGTCGCGAG TGCCGTCATT 
TCTGCGGCTC TGAGCTTCAA TGTGAAGTCT AAAATCGATC TCTTTAATGA TGCCGCCAGC
ATCCGATATC AGTCCTATCA ACTTGCCGAT GAATTAAGGC AAGGTTCCGA TGACTTAACA
CGTCTCGCCC GTACCTACGC CGTCACAGGT GATGAAAAAT ACGAAAAAAT GTATATGGAT
ATTTTGGCTA TCCGTAATGG TGAGAAACCC AGACCCGAAA AATATCATCA GATTTATTGG
GATTTGGTGC TGAGTTATGG CGATAAGCCA AAGCCAGACG GCGCGAGAAT TGCTATAAAA
GAGCAAATGA AGTCCCTTGG TTTTTCCGAT GAAGAATTCC GTTACCTCGA ACAAGCCCAA
AAAAACTCAG ATGCGTTAGT CGCCCTCGAA GTGAAAGCCA TGAATGCCGT CAAAGGTATC
TTTATGGACC CCAACACCCA AACCTACACG ATAAAAGGCG AGCCGAACTT AACCATGGCG
AGGGAGTTAT TACATAGCGA CCAATACCAT AGAGAAAAAG CCAAGATCAT GCAGCCGATT
GATGAGTTCT TTACGGCGTT GGATAAACGT ACCGATGGTG AAGTTAATGG TCGACTCGAC
TCCTTACATG CGGCATTAAA CTGGTCACAG TTCGTATTGT TCATCGTAAT TCTAGCGGCC
GTTGGTGGAT TCATTATCGT TAAGAGTCGG ATTGTGACTC CCTTAGTGCA GACCTGTAGT
GAGTTGCTCG ACATTCAGCG CTCTAAAAAC CTTGCGCGGC GGATCTCTGT CACCACTCAG
GGAGAGATTG GCGAAATCGT TAATCAAATC AACTTGTTTA TCTCTTCCCT TGCCAGTTCC
TTATCGACAA CGGATGGTAT TGCAAAAGAG GTCGCTGATT TAGCGAAGCA AACCAAGGCA
TCAATCCAAG TTTCGCGTGA AAGCTCAAAT CGGGTGGCGA GAGAACTGGA TGCCAGCGCC
AGTGCGATGG AAGAAATGAC CACGACGTTA GTGCATGTGA GTGAGAGCAC GTCGAACGCT
GAAAGTCGCG CCGCTGAAAA TGAAGCGCAT GTCACTGTGG GTAAACAGAC GGTATCGGAA
GCGTTGAAAG CCATGTCGGT ATTGGAAACT GAGTTTACCA ATACTCAAGA CTCTATGTCG
CATTTAGTGA ACGAAAGTAC CCAAGTCAGT AATGTGTTGA GTGTGATTAA GGCGATTGCA
GAGCAGACGA ATTTGCTGGC ACTGAATGCC GCGATTGAAG CCGCAAGAGC CGGTGAGCAA
GGGCGAGGTT TCGCTGTGGT TGCCGATGAG GTTAGATCAC TAGCCCAGCG AACCCAAGAT
TCCACTAAAG AAATCGATGA TATTGTCGCA AGCCTTCAAA GTCGTACGAA TCAAGTGGGC
ACATCTGTGA CTCAAGCGGC GACGCTTATG CAAAAGGCGG GAGTAGAGCT GCAACGTATC
GTGGCTGTAT TTGAGGATAT TCGTCACAGT ACGGAAGCGA TTCATGGGAT CAATACTCAG
GTTGCCGCTT CAACTGAGGA ACAGTCTTTG GTTTCTAAAG AAATTGCTTC GAGTATGATG
GTGATCCGCG ATAATTCCCG TGAAGTATCA CAAATTATCG AGCAGATAGA ATCGACCTCT
ATTAGCCTAG ATAATCAATC TCAGATACTG CGCACTAAGG CGGGGGAATA TCAGTTTTAG
 
Protein sequence
MKTKTMMSVV FSTIVASAVI SAALSFNVKS KIDLFNDAAS IRYQSYQLAD ELRQGSDDLT 
RLARTYAVTG DEKYEKMYMD ILAIRNGEKP RPEKYHQIYW DLVLSYGDKP KPDGARIAIK
EQMKSLGFSD EEFRYLEQAQ KNSDALVALE VKAMNAVKGI FMDPNTQTYT IKGEPNLTMA
RELLHSDQYH REKAKIMQPI DEFFTALDKR TDGEVNGRLD SLHAALNWSQ FVLFIVILAA
VGGFIIVKSR IVTPLVQTCS ELLDIQRSKN LARRISVTTQ GEIGEIVNQI NLFISSLASS
LSTTDGIAKE VADLAKQTKA SIQVSRESSN RVARELDASA SAMEEMTTTL VHVSESTSNA
ESRAAENEAH VTVGKQTVSE ALKAMSVLET EFTNTQDSMS HLVNESTQVS NVLSVIKAIA
EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRSLAQRTQD STKEIDDIVA SLQSRTNQVG
TSVTQAATLM QKAGVELQRI VAVFEDIRHS TEAIHGINTQ VAASTEEQSL VSKEIASSMM
VIRDNSREVS QIIEQIESTS ISLDNQSQIL RTKAGEYQF