Gene Shew185_2732 details

Gene Information

• Locus tag: Shew185_2732
• ID: 5370240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3271651
• End bp: 3273579
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640830960
• Product: IucA/IucC family protein
• Protein accession: YP_001366929
• Protein GI: 153001248
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG4264] Siderophore synthetase component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00744667
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTAC CCACAAAAGC CTTACTAATG GATCCATTGA CAACGCAAGA TCATCCAACT 
CACGCAGCGG CGGCTCAACT CAATCCTGCG CTGTCGTCAA CCTCGACTTC TATGCCGGAG 
CACTTGACCC CCGCCTATTG GCAAGCGGCT AATCGGCATT TAGTGAAGAA AATTCTCTGC 
GAATTCACTC ACGAGAAAAT CATCACGCCG ACCCTATACG GGCAAAAGGC GAGGCTTAAC 
CACTATGAAC TCAGGCTCAA AGACAGCACT TACTATTTTA GTGCGCGGCA CTATCAGCTC 
GATCATCTTG CGATTGATGC AGATTCCATC CGCGTTTCAG TCGCAGGACA AGAGCAAGCC 
CTCGATGCGA TGTCGCTGAT CATTTCCCTT AAAAATGACT TAGGGATCAG CGAAACCTTA 
CTGCCCACGT ATTTAGAGGA AATCACTAGC ACCCTCTACA GCAAGGCGTA CAAGTTAGCG 
CATCAGGCGA TCCCCGCCGC CACGCTGGCG CGAGCCGATT ATCAGAGCAT AGAAGCAGGT 
ATGACTGAAG GCCATCCGGT GTTTATTGCC AATAACGGAC GGATTGGCTT TGATATGCAG 
GATTACCGTC AATTTGCCCC AGAAAGCGCG ATGCCGATGC AGTTAGTCTG GCTTGGCGTG 
CGCAAGAGTA AGACCACGTT TGCCGCCCTC GAAAACTTGA GTCACGACGC GTTACTCAAG 
GAGGAGCTTG GCCAGCAGTT CACTGACTTC CAACAACGTC TTAAAACCCA GCAGCATGAT 
CCGCAGGACT TCTACTTTAT GCCTGTGCAT CCTTGGCAGT GGCGTGAAAA AATCGCCCGC 
GTCTTTGCCG GCGACATCGC CCGTGGCGAT CTGGTTTATC TTGGTGAAGG CAATGAGCAA 
TACCAAGTGC AGCAATCGAT ACGCACTTTC TTCAATCTTT CATCGCCACA AAAGTGCTAT 
GTCAAAACCG CGCTTTCCAT CTTAAACATG GGCTTTATGC GCGGCCTGTC GCCTCTATAC 
ATGAGCTGCA CACCGCAAAT TAATGCGTGG GTGGCGAACT TGGTTGAGAG CGACCCTTAC 
TTTACTCAAC AAGGCTTTGT GATCCTTAAA GAAATTGCCG CCATAGGTTA CCACCACCAT 
TATTATGAGC AGGCACTCAC CCAAGACAGC GCCTACAAGA AAATGCTCTC TGCCCTATGG 
CGCGAAAGCC CACTGCCGCA CATTGCGCCT AAGCAAAATC TGATGACCAT GGCTGCCCTG 
TTGCACACGG ATCATGAAGA TAAAGCGCTG ATTTCGGCCT TGATAACGGC CTCAGGCTTG 
CCAGCAAAAG ACTGGTTGAG CCGTTACCTC AACTTGTATT TATCGCCCTT ATTGCACGCG 
TTTTTTGCCT ACGATCTGGT CTTTATGCCC CACGGTGAAA ACCTGATCTT AGTGCTGGAT 
GAATATGTGC CGGTCAAGAT TTTAATGAAA GACATAGGCG AAGAAGTCGC GGTACTGAAT 
GGCACCTCGC CGCTGCCTGA TGATGTAAAA CGCCTTGCGG TAAGCCTTGA AGAAGATATG 
AAGCTTAACT ACATCTTACT GGATATTTTT GACTGTATTT TCCGCTATTT AGCACCGCTG 
TTAGATGAGC AAACCAGTGT CAGTGAAAGC CAATTCTGGG AATTAGTGGC GGACAATGTA 
CGTGACTACC AAGCTCAACA TCCACATTTG GCCGCCAAGT TTGCCCAATA CGATCTGTTT 
AAGGACAGCT TTGTACGCAC CTGCCTTAAT CGTATCCAAT TGAATAACAA CCAACAAATG 
ATAGATCTCG CCGACAGGGA GAAAAACCTA CGCTTCGCTG GCGGTATCGA CAATCCCTTG 
GCGGCCTTTA GGCAAAGCCA TGCCTTTAAG CGCCCCAAAC TTGGCAGCGC TGAATCGAAA 
ACATGTTAA 

 

Protein sequence

MNLPTKALLM DPLTTQDHPT HAAAAQLNPA LSSTSTSMPE HLTPAYWQAA NRHLVKKILC 
EFTHEKIITP TLYGQKARLN HYELRLKDST YYFSARHYQL DHLAIDADSI RVSVAGQEQA 
LDAMSLIISL KNDLGISETL LPTYLEEITS TLYSKAYKLA HQAIPAATLA RADYQSIEAG 
MTEGHPVFIA NNGRIGFDMQ DYRQFAPESA MPMQLVWLGV RKSKTTFAAL ENLSHDALLK 
EELGQQFTDF QQRLKTQQHD PQDFYFMPVH PWQWREKIAR VFAGDIARGD LVYLGEGNEQ 
YQVQQSIRTF FNLSSPQKCY VKTALSILNM GFMRGLSPLY MSCTPQINAW VANLVESDPY 
FTQQGFVILK EIAAIGYHHH YYEQALTQDS AYKKMLSALW RESPLPHIAP KQNLMTMAAL 
LHTDHEDKAL ISALITASGL PAKDWLSRYL NLYLSPLLHA FFAYDLVFMP HGENLILVLD 
EYVPVKILMK DIGEEVAVLN GTSPLPDDVK RLAVSLEEDM KLNYILLDIF DCIFRYLAPL 
LDEQTSVSES QFWELVADNV RDYQAQHPHL AAKFAQYDLF KDSFVRTCLN RIQLNNNQQM 
IDLADREKNL RFAGGIDNPL AAFRQSHAFK RPKLGSAESK TC