Gene Shew185_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2712 
Symbol 
ID5372821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3246924 
End bp3249476 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content41% 
IMG OID640830940 
Producthypothetical protein 
Protein accessionYP_001366909 
Protein GI153001228 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAGAC GAGTGCGGGT GTTTATTAGC CTTATAATAT TCACTGTCTC ATTACTCTTG 
CTTTATAATT TAGAGCAAGA ATATCAATTA AGTGACATTA TTAAAGAGGT TAAAGATTTT
TCATTTGTTG AGTTGTTATG TGCAGCGCTA CTCACCGTGG GCAGTTACTC TTTATTAACC
TTGTACGATT TTATTGCCGT TCGAAATGTC GACAAGGAGA TACCTTATCG TAAAATAGTC
CCTATTTCCT TTCTGGGTTT TACGTTCTCC AATACTATTG GGTTCTCTCT GTTAACGGGG
ACGTCGATAA GATATAAGTT TTATTCCGAA CTCGGCTTAA GTGGTAATAA AATCACTCAA
ATAGTCATTT CATGTTCAGT GACATTCTTC CTCGGACTCT TTTTTATTTG TGGTATTGCA
CTGGTATGCT TTCCCTCTGA ACAATTATCA GCCTTACCTT TGCCAACATG GTTATTTTCA
TTAACGACAG TAATCGGTAT TGGCATGCTG CTCAGTGTAT TGGGCTATTT ACTGATGAGT
GTGCTGCGGA AAAAGCCATT TAATTTTCGA GGCTTTGAAA TTACGCCACC TCTGTTATCT
GTATCTTTAA GACAGTTGTT GGTGTCTTCA CTTGATTGGA TTGTCGTAGG AACCTTGTTT
TATAGCTTAC TGCCCGCGGT AGAAAATTTG GGCTATATAC AGGTCTTAAG TATTTTCTTT
GTTGCGAATG CGCTTGGGGT GCTTGCCCAT GTGCCGGGTG GTATTGGGGT GTTCGAGTCC
GTCGTGACTG TGGCCTTATC GCAATATTTA CCGGTTGAGC AAATCCTCGG CGCCATTATT
ATCTATCGGA TCATTTATTA CATTATTCCA TTTTTAATTT CTTTGGCATA CTTTGTTATT
ACGATCGCAC TGTCAAATAA AGATAAAATT GTAAAATTAA ATACTCGAAT TGCATTTATC
CGCCAACTGT TACCACCGCT ACTGAGTATC AGTGTATTTA GCTCAGGTTT ATTATTACTC
TTGTCAGTGG TTAACCCTTC AATTATTCAT AAGTATCACT GGTTAGGTGA GTTAGTACCG
CTGCCTATCA TCGAAATATC GAGCATCATT TTGAGTGTGA GTGGTGTCTT GCTATTGTTG
TTATCCCATG GATTATTTAA ACGCTACCAT AATACCTTTG AATTAACGAA AAAACTGCTG
TTGGTGGGCA TGTTATTTAT TATGCTTAAG GGCGCGGAAT GGGAAATATC ACTCGCGATA
GGATTAGTGT ACGCATTGAT GTTGCCATGT GAGAATTTGT TTTATCGAAA GGGTTCAGTC
GTCGGGATTA AATACTCTTT GGGTTGGCTG TTATCACTTT CTGCAGCCTT ATTCTTGATG
ATTTGGGTAT TATTTTTCTC CTATCAAGAT GTTGATTATG ATCATTCACT CTGGTTTACC
TTCTCCCCCG ATAGCCATGT ATCACGAGCA TTGCGAGGAG GAGCGATTGC TATCTTTATC
GTGCTTGCCT TTGTCGTGCG CTATTTCTCG TCACGAACTC AGCTTAAATC ACCACAACTG
GACACGCCTT CATTAAAGCA GGCGATGGAG ATTGTCGCGC AGTCGCCGAG CAGTCATGGC
TATTTAACCT TAGTGCAAGA TAAATCAATC CTATTTAACG AGGATAAAGA TGCCTTTCTT
ATGTATGCAA GGGCCGGACA TTGCTGGGTG GTAATGGGCG ATCCAATTGG TAATCAACAT
AAATTTGATG ATTTGTTGTG GCAGTTTAGG GAGTTATGCG ATGCCTACGA TGGTTGGCCG
GTGTTTTATC AAGTGACGCA AAAATATCTG CCGAGCTTTT TAGAGCAAGG ATTAGGTTTA
TATAAATTAG GCGAGGAGGC GATTGTTCAG CTCGACCAAT TTGACTTACC GTCGAGTCGC
TATCGGAGTT TGCGCCAGAG TCATGCCAAG GCGCAGCGTG AAGGCTTAAG TTTTGCTGTG
ATTGAGGCGA GCCAAGTGAG GGCCATACTG CCGCAATTAG AAACCATATC ATCGACTTGG
CTGAAGGCGA AGCAAGGGCG CGAAAAGGGG TTTTCTGTAG GCTATTTCTC TTCCGCCTAT
CTGTGCTCGA CACCTATGGC ATTAGTGTAT GCAAACGGTG AACTCGTGGC GTTTTCAAAT
ATTTGGGCGA GTGCCGCTCA GGTTGAATTT TCTGTCGATC TGATGCGTTA CGAGCCTAAA
TTATCGAGCA GTAATATTAT GGATTTTCTA TTTACTGAGC TATTGCTATG GGGAAAACAG
CAAGGCTATC AGAAATTTAA TCTTGGGATG GCGCCTATGT CAGGCTTGAC CGACAGAGCG
TTGGTGCCAT TTTGGACTAA GTTGGCGAAG GTTGTGTATA AGAAGGGTAA TAAGTTTTAT
AACTTTCAGG GGCTTAGAAG ATACAAGGAT AAGTTTAATC CAACGTGGGA GGCTAAGTAT
TTGATTTGTT ATGGCGGATT ATCTCTGCCA ATTGTAGTGG GCAGTTTAGT GACATTAACG
AGTCGTGGTG CAACCGGTGT ATTTAAAAAG TAG
 
Protein sequence
MGRRVRVFIS LIIFTVSLLL LYNLEQEYQL SDIIKEVKDF SFVELLCAAL LTVGSYSLLT 
LYDFIAVRNV DKEIPYRKIV PISFLGFTFS NTIGFSLLTG TSIRYKFYSE LGLSGNKITQ
IVISCSVTFF LGLFFICGIA LVCFPSEQLS ALPLPTWLFS LTTVIGIGML LSVLGYLLMS
VLRKKPFNFR GFEITPPLLS VSLRQLLVSS LDWIVVGTLF YSLLPAVENL GYIQVLSIFF
VANALGVLAH VPGGIGVFES VVTVALSQYL PVEQILGAII IYRIIYYIIP FLISLAYFVI
TIALSNKDKI VKLNTRIAFI RQLLPPLLSI SVFSSGLLLL LSVVNPSIIH KYHWLGELVP
LPIIEISSII LSVSGVLLLL LSHGLFKRYH NTFELTKKLL LVGMLFIMLK GAEWEISLAI
GLVYALMLPC ENLFYRKGSV VGIKYSLGWL LSLSAALFLM IWVLFFSYQD VDYDHSLWFT
FSPDSHVSRA LRGGAIAIFI VLAFVVRYFS SRTQLKSPQL DTPSLKQAME IVAQSPSSHG
YLTLVQDKSI LFNEDKDAFL MYARAGHCWV VMGDPIGNQH KFDDLLWQFR ELCDAYDGWP
VFYQVTQKYL PSFLEQGLGL YKLGEEAIVQ LDQFDLPSSR YRSLRQSHAK AQREGLSFAV
IEASQVRAIL PQLETISSTW LKAKQGREKG FSVGYFSSAY LCSTPMALVY ANGELVAFSN
IWASAAQVEF SVDLMRYEPK LSSSNIMDFL FTELLLWGKQ QGYQKFNLGM APMSGLTDRA
LVPFWTKLAK VVYKKGNKFY NFQGLRRYKD KFNPTWEAKY LICYGGLSLP IVVGSLVTLT
SRGATGVFKK