Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2707 |
Symbol | |
ID | 5372118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3241004 |
End bp | 3243514 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640830935 |
Product | hypothetical protein |
Protein accession | YP_001366904 |
Protein GI | 153001223 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTTAA GTCTGGCATG GCGCCTGTTT AAGCGCGAGT TACAGCAAGG GCAATTGTTA TTGATTATCC TCGCTATTAC GCTCGCGGTA CTGTCTGTGA GTGGGTTGGC ACGGGTGAGT GAACGGCTGC AAGTGGCGAT CACTGGGCAA GCTTCACAGT TTATTGCTGC CGATCGGATT ATCGATTCGC CGGTTAAAAT TGATGCGGCG ATTTTAACCA ATGCCGAAGA TCTTGGGCTT AAGCATGTGA CGAACATGCA ATTTAATTCC ATGGTCTATT CGGGTGATAA GTTTCAGTTA GTCACAATTC GCGCCGTTGA AACGGGTTAT CCACTCAAGG GCGACATTGA ACTCACCAGC GGTAAAACCA AGGCTTTACC CCAAGCGGGC GAAATCTGGT TTGAAACTCG CTTAGGTGGA CTCCTCGGTT ATCCCAAATC CATCGAACTA GGTAATAGCG AATTTGTGCT CAGCAATGAG ATCAGCCGCT TACCCGACGC GGGCTTTAAT CCTTTTGCTT CATCGCCCGT GGTATTAATG CGCATGGAAG ATGTCGCCAA AACGGGAGTG ATTCAACCGG GCAGCCGCGT GACCTATCTG TATCAATTTG CAGGCGATGA AGCCTCGCTT ACGGCTTTTG AGCAAAGTGT TAAACCGCTT CTCAATAGCA CCCAGCGCTG GGTCGATGTG CAATCCGGTG ACTCGCCGAT TGCGGGAGCC GTTAAGCGAG CTGAGCGCTT CCTACTGCTG GCTAGTTTGA TGGGCATTGC ACTGGCCTGC GCCGCGATAG GCATTGCCGC CCAGCGTTAT TGTCAGCGCC ATTACGATGT GGTGGCCATG CTGAAAACCT TTGGCGCCTC GTCAAAGCAA ATTCGGTTGT TGTTCGGCAC TCACTTATTG TTAGTGACGT TAATGGGGAT TGTGCTTGGC ATTATCGGTG GTGTGTTACT CGATTTTGGG ATCAGTTATT TATTGCCGCC CGAAATTGCC GCCTATTCGC CGCCACTCAC TCGGCCATTA CTGCTTGGTG TAAGCACAGG ACTTATCAGC GCCTTTATGT TTTCGGCTTA TCCACTGATG CGCTTACTGG CTATTCCGCC ACTACGAGTG CTACAGCGTC AGTTAGAAGG CCTGCAACTG GGGATGTGGC TGCATCTGCT TTTGAGCTTA GGGGCGATGG CGTTACTGGG CTATTTGTAT TCCCAAAGTT GGGCTTTGAC CCTGACTGTG GTCGCGGCCG TGTTGCTGCT CGGTGTGCTG TTAAGTGTGC TTGGCTTTGT GATGATACGT TTAGGCCACA GTGTCGGCAT GAAGACCACC AATCCCTTAC AGTTGGCACT GGCAGGGCTC AGACGTCGTG CGCGGCAAAA TGCGGTGCAA TTGGTGGGAT TTAGCGCTGC ACTGGTATTG TTATTGACGA TTCTGGCGTT AAGACAAGAC TTGCTCAACG AGTGGCAAAA GCAGTTGCCC GAAAATGCAC CTAACTACTT CCTCGTTAAT ATTGCCCCCG ACGATGCTAA GCCCTTAAAT GATTTCATGA CGACTAAGGG GATAGTCGCG ACGGACATTT ATCCTGTGAT CCGTGGCCGT TTAACTCAAA TTAACGGTGA AGCGTTGATT TCGAATGAAC AGTCTGAAGC GGGTGAAAAG GGCAGAGTGG GTATTTCCCG CGAGTTAAAC CTAACGTGGC GCAATACGCT GCCTGCTAAC AACGAACTGT TAGAGGGGCA TTTTAATCAA GCGGCCGATG AAGTGTCGGT GGAATCTGGC GTGGCGGACC GTTTGGGTAT TAGCATTGGC GATAAGCTCA CTTATATTAT TGATAATCAA GAGCTCACAG TTAAAGTTGC CAGTATCCGT GCCGTGCACT GGGAAACGCT GCAGCCGAAC TTCTTTATGA TTTTTACCCA AGAAGCGCTC GCGCCCTTTG CTTATACCTC GATGGCGAGT TTTTATCTGA ACGACCAGTC AACAAATGAC CCAGCAACAA ACGGCCAAGC GCTGAGTGCC GATGGTACAC CTAAGGATGC GGTGATCCTT GCGCTTATTC AGCAATTCCC GACCATATCG ATCATCGATG TGGGTGCTAT GGTGGGGCAG TTACGGCAGA TCATAGAGCA AGTGTCGCTG TCGCTGACCT TAGTGCTGGC CTTAGTGTTA CTGGCAAGTG CCTTAGTCTT GATTGCACAG ACTGAAGCGG GCATGGCAAC TCGGCAGCGC GAACTGGCTG TGCTGCGTAC CTTTGGCGCT TCGGGATGGC TATTGCGCAG TGCAACGGGT TTAGAGTTTG CCTTGCTTGG CGGTATTGCG GGCGTGTTAG CCGTCATAGT GGCCGAATTT GCGTTATATC TACTTAAGAC GCAAGTGTTT GAGCTTAATG TGTATATGCA CTGGCCTTGG TGGGGAATAG CCCCTGTTTC TGGCGCATTA ATCGTGGCCT TACTTGGGGT GTGGCGTTGC CGACAATTGC TCAGCCAATC TTGCTCTGAG CTATTAAAGG CGGGTAGCTA A
|
Protein sequence | MELSLAWRLF KRELQQGQLL LIILAITLAV LSVSGLARVS ERLQVAITGQ ASQFIAADRI IDSPVKIDAA ILTNAEDLGL KHVTNMQFNS MVYSGDKFQL VTIRAVETGY PLKGDIELTS GKTKALPQAG EIWFETRLGG LLGYPKSIEL GNSEFVLSNE ISRLPDAGFN PFASSPVVLM RMEDVAKTGV IQPGSRVTYL YQFAGDEASL TAFEQSVKPL LNSTQRWVDV QSGDSPIAGA VKRAERFLLL ASLMGIALAC AAIGIAAQRY CQRHYDVVAM LKTFGASSKQ IRLLFGTHLL LVTLMGIVLG IIGGVLLDFG ISYLLPPEIA AYSPPLTRPL LLGVSTGLIS AFMFSAYPLM RLLAIPPLRV LQRQLEGLQL GMWLHLLLSL GAMALLGYLY SQSWALTLTV VAAVLLLGVL LSVLGFVMIR LGHSVGMKTT NPLQLALAGL RRRARQNAVQ LVGFSAALVL LLTILALRQD LLNEWQKQLP ENAPNYFLVN IAPDDAKPLN DFMTTKGIVA TDIYPVIRGR LTQINGEALI SNEQSEAGEK GRVGISRELN LTWRNTLPAN NELLEGHFNQ AADEVSVESG VADRLGISIG DKLTYIIDNQ ELTVKVASIR AVHWETLQPN FFMIFTQEAL APFAYTSMAS FYLNDQSTND PATNGQALSA DGTPKDAVIL ALIQQFPTIS IIDVGAMVGQ LRQIIEQVSL SLTLVLALVL LASALVLIAQ TEAGMATRQR ELAVLRTFGA SGWLLRSATG LEFALLGGIA GVLAVIVAEF ALYLLKTQVF ELNVYMHWPW WGIAPVSGAL IVALLGVWRC RQLLSQSCSE LLKAGS
|
| |