Gene Shew185_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2707 
Symbol 
ID5372118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3241004 
End bp3243514 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content51% 
IMG OID640830935 
Producthypothetical protein 
Protein accessionYP_001366904 
Protein GI153001223 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA GTCTGGCATG GCGCCTGTTT AAGCGCGAGT TACAGCAAGG GCAATTGTTA 
TTGATTATCC TCGCTATTAC GCTCGCGGTA CTGTCTGTGA GTGGGTTGGC ACGGGTGAGT
GAACGGCTGC AAGTGGCGAT CACTGGGCAA GCTTCACAGT TTATTGCTGC CGATCGGATT
ATCGATTCGC CGGTTAAAAT TGATGCGGCG ATTTTAACCA ATGCCGAAGA TCTTGGGCTT
AAGCATGTGA CGAACATGCA ATTTAATTCC ATGGTCTATT CGGGTGATAA GTTTCAGTTA
GTCACAATTC GCGCCGTTGA AACGGGTTAT CCACTCAAGG GCGACATTGA ACTCACCAGC
GGTAAAACCA AGGCTTTACC CCAAGCGGGC GAAATCTGGT TTGAAACTCG CTTAGGTGGA
CTCCTCGGTT ATCCCAAATC CATCGAACTA GGTAATAGCG AATTTGTGCT CAGCAATGAG
ATCAGCCGCT TACCCGACGC GGGCTTTAAT CCTTTTGCTT CATCGCCCGT GGTATTAATG
CGCATGGAAG ATGTCGCCAA AACGGGAGTG ATTCAACCGG GCAGCCGCGT GACCTATCTG
TATCAATTTG CAGGCGATGA AGCCTCGCTT ACGGCTTTTG AGCAAAGTGT TAAACCGCTT
CTCAATAGCA CCCAGCGCTG GGTCGATGTG CAATCCGGTG ACTCGCCGAT TGCGGGAGCC
GTTAAGCGAG CTGAGCGCTT CCTACTGCTG GCTAGTTTGA TGGGCATTGC ACTGGCCTGC
GCCGCGATAG GCATTGCCGC CCAGCGTTAT TGTCAGCGCC ATTACGATGT GGTGGCCATG
CTGAAAACCT TTGGCGCCTC GTCAAAGCAA ATTCGGTTGT TGTTCGGCAC TCACTTATTG
TTAGTGACGT TAATGGGGAT TGTGCTTGGC ATTATCGGTG GTGTGTTACT CGATTTTGGG
ATCAGTTATT TATTGCCGCC CGAAATTGCC GCCTATTCGC CGCCACTCAC TCGGCCATTA
CTGCTTGGTG TAAGCACAGG ACTTATCAGC GCCTTTATGT TTTCGGCTTA TCCACTGATG
CGCTTACTGG CTATTCCGCC ACTACGAGTG CTACAGCGTC AGTTAGAAGG CCTGCAACTG
GGGATGTGGC TGCATCTGCT TTTGAGCTTA GGGGCGATGG CGTTACTGGG CTATTTGTAT
TCCCAAAGTT GGGCTTTGAC CCTGACTGTG GTCGCGGCCG TGTTGCTGCT CGGTGTGCTG
TTAAGTGTGC TTGGCTTTGT GATGATACGT TTAGGCCACA GTGTCGGCAT GAAGACCACC
AATCCCTTAC AGTTGGCACT GGCAGGGCTC AGACGTCGTG CGCGGCAAAA TGCGGTGCAA
TTGGTGGGAT TTAGCGCTGC ACTGGTATTG TTATTGACGA TTCTGGCGTT AAGACAAGAC
TTGCTCAACG AGTGGCAAAA GCAGTTGCCC GAAAATGCAC CTAACTACTT CCTCGTTAAT
ATTGCCCCCG ACGATGCTAA GCCCTTAAAT GATTTCATGA CGACTAAGGG GATAGTCGCG
ACGGACATTT ATCCTGTGAT CCGTGGCCGT TTAACTCAAA TTAACGGTGA AGCGTTGATT
TCGAATGAAC AGTCTGAAGC GGGTGAAAAG GGCAGAGTGG GTATTTCCCG CGAGTTAAAC
CTAACGTGGC GCAATACGCT GCCTGCTAAC AACGAACTGT TAGAGGGGCA TTTTAATCAA
GCGGCCGATG AAGTGTCGGT GGAATCTGGC GTGGCGGACC GTTTGGGTAT TAGCATTGGC
GATAAGCTCA CTTATATTAT TGATAATCAA GAGCTCACAG TTAAAGTTGC CAGTATCCGT
GCCGTGCACT GGGAAACGCT GCAGCCGAAC TTCTTTATGA TTTTTACCCA AGAAGCGCTC
GCGCCCTTTG CTTATACCTC GATGGCGAGT TTTTATCTGA ACGACCAGTC AACAAATGAC
CCAGCAACAA ACGGCCAAGC GCTGAGTGCC GATGGTACAC CTAAGGATGC GGTGATCCTT
GCGCTTATTC AGCAATTCCC GACCATATCG ATCATCGATG TGGGTGCTAT GGTGGGGCAG
TTACGGCAGA TCATAGAGCA AGTGTCGCTG TCGCTGACCT TAGTGCTGGC CTTAGTGTTA
CTGGCAAGTG CCTTAGTCTT GATTGCACAG ACTGAAGCGG GCATGGCAAC TCGGCAGCGC
GAACTGGCTG TGCTGCGTAC CTTTGGCGCT TCGGGATGGC TATTGCGCAG TGCAACGGGT
TTAGAGTTTG CCTTGCTTGG CGGTATTGCG GGCGTGTTAG CCGTCATAGT GGCCGAATTT
GCGTTATATC TACTTAAGAC GCAAGTGTTT GAGCTTAATG TGTATATGCA CTGGCCTTGG
TGGGGAATAG CCCCTGTTTC TGGCGCATTA ATCGTGGCCT TACTTGGGGT GTGGCGTTGC
CGACAATTGC TCAGCCAATC TTGCTCTGAG CTATTAAAGG CGGGTAGCTA A
 
Protein sequence
MELSLAWRLF KRELQQGQLL LIILAITLAV LSVSGLARVS ERLQVAITGQ ASQFIAADRI 
IDSPVKIDAA ILTNAEDLGL KHVTNMQFNS MVYSGDKFQL VTIRAVETGY PLKGDIELTS
GKTKALPQAG EIWFETRLGG LLGYPKSIEL GNSEFVLSNE ISRLPDAGFN PFASSPVVLM
RMEDVAKTGV IQPGSRVTYL YQFAGDEASL TAFEQSVKPL LNSTQRWVDV QSGDSPIAGA
VKRAERFLLL ASLMGIALAC AAIGIAAQRY CQRHYDVVAM LKTFGASSKQ IRLLFGTHLL
LVTLMGIVLG IIGGVLLDFG ISYLLPPEIA AYSPPLTRPL LLGVSTGLIS AFMFSAYPLM
RLLAIPPLRV LQRQLEGLQL GMWLHLLLSL GAMALLGYLY SQSWALTLTV VAAVLLLGVL
LSVLGFVMIR LGHSVGMKTT NPLQLALAGL RRRARQNAVQ LVGFSAALVL LLTILALRQD
LLNEWQKQLP ENAPNYFLVN IAPDDAKPLN DFMTTKGIVA TDIYPVIRGR LTQINGEALI
SNEQSEAGEK GRVGISRELN LTWRNTLPAN NELLEGHFNQ AADEVSVESG VADRLGISIG
DKLTYIIDNQ ELTVKVASIR AVHWETLQPN FFMIFTQEAL APFAYTSMAS FYLNDQSTND
PATNGQALSA DGTPKDAVIL ALIQQFPTIS IIDVGAMVGQ LRQIIEQVSL SLTLVLALVL
LASALVLIAQ TEAGMATRQR ELAVLRTFGA SGWLLRSATG LEFALLGGIA GVLAVIVAEF
ALYLLKTQVF ELNVYMHWPW WGIAPVSGAL IVALLGVWRC RQLLSQSCSE LLKAGS