Gene Shew185_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2706 
Symbol 
ID5373658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3240070 
End bp3240732 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content49% 
IMG OID640830934 
Productsignal peptidase I 
Protein accessionYP_001366903 
Protein GI153001222 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAG GAATAACCAA ACTGCTTAAG GATAATCGCT CCTTTTTTCT GTTTATCAGT 
TTAATGTTAG TGTTCAGGAG CGCTGTGGCT GATTGGAATA CAGTGCCATC GGGTTCTATG 
CTGCCGACTA TCGTCGAGGG CGATCGCATT CTGGTGAACA AGATGGCCTA CGATCTTAGG 
GTGCCATTTA CCCATATCGC CTTAGTCAAA CTGGCGGATC CCGCCCGCGG TGATATCGTG 
GTGTTCGATT CGAAAAAGGC CGATAAAAAA CTCATTAAGC GGGTGATTGC TGTGCCAGGC 
GATACTGTGA TGATGCGGGA TAATCGTTTG TATTTAAATG GCGAACCCCT TGGTTACGCT 
TCCCAAGCAT TGAGTCCTTA TGCTCCCGCT GATGTCACAG AAATGCAGGA GAACTTACTC 
GGTATGGCCC ACAGTATTCG CCTTAATCCT GTCCCCTCAA GACTCGCCAA TTTTGGGCCA 
GTCACTGTGC CAGACGCGCA TTACCTAGCG CTGGGTGATA ATCGAGATAA CAGCGCTGAT 
TCTCGGGTCA TTGGCTTTGT GCCACGCGAT GAGATTGTAG GCCGTTCAAG CTCAGTGGTT 
TTCTCCCTTG ATTATGCTGA TCATTACTTG CCTCGACCTG AGCGCCTTAT GCGCGAGTTT 
TAG
 
Protein sequence
MFKGITKLLK DNRSFFLFIS LMLVFRSAVA DWNTVPSGSM LPTIVEGDRI LVNKMAYDLR 
VPFTHIALVK LADPARGDIV VFDSKKADKK LIKRVIAVPG DTVMMRDNRL YLNGEPLGYA 
SQALSPYAPA DVTEMQENLL GMAHSIRLNP VPSRLANFGP VTVPDAHYLA LGDNRDNSAD 
SRVIGFVPRD EIVGRSSSVV FSLDYADHYL PRPERLMREF