Gene Shew185_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2702 
Symbol 
ID5369740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3235632 
End bp3236741 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content46% 
IMG OID640830930 
Producthypothetical protein 
Protein accessionYP_001366899 
Protein GI153001218 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00759105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGAC CTAATGCGCC CTCTGCTGCT TACCGTGGCT TTGCGGTTAT GGCCTTTGTA 
GTGATTATTT TGGCAGGGAT TAAGGCGGCG AGCCCGATTG TGGTGCCGTT TGTGCTATCC
AGTTTTCTGG CGGTGATTTG TAATCCCGCG ATTGGTTTAA TGACCAAATT CCGTGTGCCT
AAATGGCTGG CGGTGATCCT CTTGATGGGA TTTATTGTGT TGATGGGCCT CTGGTTAGCC
TCGGTTGTCG GCAGTTCAGT CAATGAGTTC TCCAAACAAT TGCCCCAATA TCGGGTGCAG
TTAGTCGAGC AATTTGCTTG GATATTAAAT AAGTTACATT CCTTCAATAT TCAGATTTCG
AAGGATCAAG TGTTAGCGTA TTTTGACCCT GGCATGGCCT TGTCTATGAC CACTAATATG
CTGTCGGGTG TCGGCAATGT GATGGCGAAT TTATTTCTGA TCATCTTAAC CATCGTCTTC
ATGCTGTTTG AAGCCCAATC GTTACCAAAG AAATTACATT TGGCGCTGGA CGATCCCGAT
ATGCGCCTCA AGCAGATTGA CCGCTTTTTA CAATCGGTTA ATCAATACAT GGTGATCAAG
ACGCTAGTAA GCTTAGCGAC CGGGGTTATC GTCGGTGTCG GTTTAACCAT TATTGGCGTG
GATTACGCCA TGCTGTGGGC GGTGATCGCC TTCCTATTTA ATTACATTCC TAATATCGGT
TCTATCATTG CCGCCATTCC TGCGGTGTTA TTAGCCTTCA TTCAGCTTGG CCCTGCGGCA
GCGGGCGGTA CTGCGCTTTT GTATGTTGGT GCCAACATGG TGATGGGCAA TATGATTGAA
CCTAGATTTA TGGGCCGCGG CTTAGGCTTA TCGACCTTAG TGGTGTTTTT ATCGTTAATT
TTTTGGGGCT GGTTGCTAGG TTCTGTCGGC ATGTTGTTGT CGGTGCCGCT GACTATGGTG
GTTAAAATTG CCCTCGAATC GAGTAAAAGT GGTAACTGGT TAGCCATATT ATTATCGGAC
GATGTTGAAG ATAAGTTCGT GGCCAACAAT ACGGAAAACT CAAGTTCCGA TGGCGATGAC
GCCGATACAA GTACAACAGA GAGTAAGTAA
 
Protein sequence
MTRPNAPSAA YRGFAVMAFV VIILAGIKAA SPIVVPFVLS SFLAVICNPA IGLMTKFRVP 
KWLAVILLMG FIVLMGLWLA SVVGSSVNEF SKQLPQYRVQ LVEQFAWILN KLHSFNIQIS
KDQVLAYFDP GMALSMTTNM LSGVGNVMAN LFLIILTIVF MLFEAQSLPK KLHLALDDPD
MRLKQIDRFL QSVNQYMVIK TLVSLATGVI VGVGLTIIGV DYAMLWAVIA FLFNYIPNIG
SIIAAIPAVL LAFIQLGPAA AGGTALLYVG ANMVMGNMIE PRFMGRGLGL STLVVFLSLI
FWGWLLGSVG MLLSVPLTMV VKIALESSKS GNWLAILLSD DVEDKFVANN TENSSSDGDD
ADTSTTESK