| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2696 |
|---|
| Symbol | |
|---|
| ID | 5369933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3230666 |
|---|
| End bp | 3231694 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640830925 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001366894 |
|---|
| Protein GI | 153001213 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000117153 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTA AAGTTATTGG TATCGATTTA GCCAAAAATG TTTTTCAAGT TTGTGTTTGT
CTTATGGATA ACTCAGTCAT GAGTAACAAA AAGGTTAACA GAAACAAGCT GCTCGATAAA
ATTAGACAAT TCCCCGAAGG TAGTCTTATT GCTATGGAGG CCTGTGGAAC AGCGCATTAC
TGGGGAAGAC AATTTCAAGC ACTTGGTTAT CAAGTACAAC TGATCCCTGC TCAACATGTT
AAGCCATTTG TTGCAAACCA AAAGAATGAT GCCAACGATG CACTCGCGAT ATGCGAAGCT
GCTTTCAGAC CTAATATCCA TATGGTTCCA GTTAAAACTG TTGAGCAGCA AGACATAAAA
GCATTACGTT GTGTACGTAG TCGTCTAGTT CAAAATCGAA CCGCCATGGT CAATCAAATT
CGAAGCCTAG CGAGCGAGTC TGGTGTGATC TTCTCTGTCG GCAGATTGCA ATTACAAGCG
TCACTTAGCC GTATTTTAGC AGATAATGAG CATGAACTGT CTCATACGCT TCATCACCTG
TTAAAATTTT TGTATGAAGA TTTATGTGTT TTAAATGAGA AAATTAATCA AATCGAGCGC
GACATTAAAG CACTATGTCA AATCCAACCT CGCTACAATG CATTGCTGTC GATCCCTGGC
TTTGGACCAT TAGTCACGGC AAGCTTTATG AGTGAATTAG GTTCGGGTCA TCAATTTAAA
AATGGCCGGC AATTATCTGC ATGGTGTGGC TTAGTGCCAT CACAATCGAG TTCCGGTGGA
AAAGTTCGAC TAGGATCGAT CACGAAAAAT GGCAGCTCAG AACTACGCGT TTTACTCATC
CATGGTGCCA GAGCCGTTGG CCGATTTGCG AGCAAACGTG ATGATAGACT TGGACGATGG
TTTAATGCGC TTGCGTTAAG GCAAGGTCGA CACAAAGCCG TTGTCGCATT GGCTAATAAA
ATAGCGCGTA TAGGATGGCG GATCCTCACG AGTAACGATA ATTTCGACGT TAATAAAGCG
TTTGCGTAA
|
|---|
| Protein sequence | MDIKVIGIDL AKNVFQVCVC LMDNSVMSNK KVNRNKLLDK IRQFPEGSLI AMEACGTAHY
WGRQFQALGY QVQLIPAQHV KPFVANQKND ANDALAICEA AFRPNIHMVP VKTVEQQDIK
ALRCVRSRLV QNRTAMVNQI RSLASESGVI FSVGRLQLQA SLSRILADNE HELSHTLHHL
LKFLYEDLCV LNEKINQIER DIKALCQIQP RYNALLSIPG FGPLVTASFM SELGSGHQFK
NGRQLSAWCG LVPSQSSSGG KVRLGSITKN GSSELRVLLI HGARAVGRFA SKRDDRLGRW
FNALALRQGR HKAVVALANK IARIGWRILT SNDNFDVNKA FA
|
|---|
| |