Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2691 |
Symbol | pflA |
ID | 5370075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3224627 |
End bp | 3225367 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640830920 |
Product | pyruvate formate lyase-activating enzyme 1 |
Protein accession | YP_001366889 |
Protein GI | 153001208 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00335137 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGTTA TCGGTCGGAT CCACTCGGTG GAATCCTTTG GCACAGTCGA TGGTCCAGGC ATACGGTTTA TCACCTTTAT GCAAGGCTGT TTAATGCGCT GCCAATATTG CCACAACCGT GACACTTGGG ATCTTGATGG CGGAAAAGAA GTTCTGGTCG ATGAGTTAAT GAGTCAAATC ATCAGCTATC GGCCTTTTCT CGATGCCAGC AATGGTGGTG TTACGGCCAG TGGTGGTGAA GCCATTTTAC AGGCAGAATT CGTCGCCGAA TTATTCACAG CCTGTCAGCA AGAAGGTATT CATACCTGTT TAGATACCAA TGGTTTTGTA CGTAAGTACA CGCCAGTGAT TGATGAGTTA CTCGACCACA CTAACTTGGT CCTGCTCGAC ATCAAACACA TGGACGATGA AAAACATATT GAGTTAACTA AAGTCAGCAA CCATAGAACA CTGCAATTTG CGCAGTATTT GGCAGAGCGT AATCAAGCGA CTTGGATACG GTATGTGGTG GTGGGCGGAT TTACCGACGA TGAAGCATCG GCATTACAAC TGGCCGAGTT TATCAAGCCC ATGAAAAACA TTGAAAAGGT AGAATTACTA CCCTATCACG AATTAGGTAA ACACAAGTGG GAAGCCATGG GCGAAAGCTA TCAACTCGAT GGCATATCAC CACCGAGCCG AGAAACCATG GAAAAGATCA AAGCCGTATT TGTTGGGCAA GGGATTAACG CGATTTATTA A
|
Protein sequence | MAVIGRIHSV ESFGTVDGPG IRFITFMQGC LMRCQYCHNR DTWDLDGGKE VLVDELMSQI ISYRPFLDAS NGGVTASGGE AILQAEFVAE LFTACQQEGI HTCLDTNGFV RKYTPVIDEL LDHTNLVLLD IKHMDDEKHI ELTKVSNHRT LQFAQYLAER NQATWIRYVV VGGFTDDEAS ALQLAEFIKP MKNIEKVELL PYHELGKHKW EAMGESYQLD GISPPSRETM EKIKAVFVGQ GINAIY
|
| |