| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2673 |
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| Symbol | |
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| ID | 5371971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3196071 |
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| End bp | 3197807 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830902 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001366871 |
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| Protein GI | 153001190 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTTC AAACACTAAC GTATATTATC GTAGGGCTCT CGTTTGCGCT CTACATTGGG
ATTGCAATCT GGACTCGAGC GGGTTCAACC AAAGAATTCT ATGTTGCAGG TGGCGGTGTT
CACCCTGTTG TTAACGGTAT GGCGACGGCG GCGGACTGGA TGTCGGCGGC GTCGTTTATT
TCATTAGCGG GTATTGTGTC TTTCGTCGGT TACGACGGTA GCGTGTACTT AATGGGCTGG
ACGGGCGGTT ACGTATTGTT GGCTCTGTGT ATGGCGCCGT ATTTACGTAA GTTTGGTAAG
TTCACTGTGC CAGATTTCGT TGGTGAGCGT TATTACTCAC AGGCCGCACG CACAGTGGCG
GTTATCTGTG CCATCTTTAT CTGTTTTACT TACATTGCAG GGCAAATGCG CGGTGTGGGC
GTGGTGTTTT CGCGTTTCTT AGAAGTGGAA GTCGACACGG GCGTATATAT CGGTATGGCG
GTCGTGTTCT TCTACGCCGT ACTCGGTGGT ATGAAAGGGA TTACTTACAC TCAGGTTGCT
CAGTACTGTG TATTGATTTT CGCTTTCATG GTGCCAGCCA TATTCTTGTC TGTAATGATG
ACAGGCCACA TTATTCCACA AGTGGGTTTC GGTGCTGAAT TACTCGATGC CGCGGGTAAT
AATAGTGGTG TTTACTTGCT TGAAAAACTC AACAATGTGT CAACTGAACT TGGCTTTGCC
CCTTACACCG ACGGTTCTAA GAGCATGATT GATGTGTTCT GTATTACTGG CGCGTTAATG
ATGGGTACTG CGGGTTTACC CCACGTTATC GTGCGTTTCT TTACTGTACC TAAAGTGAAA
GATGCGCGTA TCTCTGCGGG TTGGGCGTTA GTGTTCATCG GTATCATGTA TACCACAGTA
CCTGCGTTGT CAGCGTTCTC TCGCGTAAAC ATGATTGAAA CCATTAACGG TGCTGATTCG
CAAGGTGTGG CTTATGAGTC TGCGCCGCAG TGGATTAAAA ACTGGGAAAA AACCGGCTTA
ATCAAGTGGA ACGACAAAAA CGGCGACGGC AAACTTTATT ACGCAGCTGG TAAGATGGAA
GATCCTGCTA GTAAAAACGA AATGAAGATC GATAACGACA TTATAGTATT AGCGACGCCA
GAAATTGCTA ACTTGCCAGC CTGGGTTATC GCCTTGGTTG CAGCGGGGGG GTTAGCGGCG
GCCTTGTCAA CTTCTGCGGG TTTGTTGTTG GTGATTTCAA CCTCGGTCTC ACACGATTTA
CTGAAGAAAA ACTTGATGCC AAATATCTCC GATAAAAAAG AGCTGATGTT TGCTCGTTTA
GCGGCGGGTG TGGGCATTGT GATTGCGGGT TACTTTGGGG TGAATCCACC AGGCTTTGTG
GCCGCGGTGG TGGCGTTCGC CTTCGGGTTA GCAGCATCAT CACTGTTCCC TGCGATCATC
ATGGGTATCT TCTCTAAGAC AATGAACAAA GAAGGCGCGA TTGCCGGTAT GTTAACGGGT
CTACTGTTTA CAGCCAGCTA TATCATCTAC TTCAAGTTTG TTGACCCAAC GGGTAACGTT
GCCGCTAACT GGTTCCTCGG TATTTCACCA GAAGGTATCG GTATGGTGGG TATGTTAGTG
AACTTCGGTG TGGCGGCGTT AGTGAGTCGT GTGACTACGG CAACGCCATT ACATGTTCAG
GAGATGGTCG AATCGATTCG TTTCCCTAAA GGTTCGGGTG AAGCGAGCGG TCACTAA
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| Protein sequence | MDVQTLTYII VGLSFALYIG IAIWTRAGST KEFYVAGGGV HPVVNGMATA ADWMSAASFI
SLAGIVSFVG YDGSVYLMGW TGGYVLLALC MAPYLRKFGK FTVPDFVGER YYSQAARTVA
VICAIFICFT YIAGQMRGVG VVFSRFLEVE VDTGVYIGMA VVFFYAVLGG MKGITYTQVA
QYCVLIFAFM VPAIFLSVMM TGHIIPQVGF GAELLDAAGN NSGVYLLEKL NNVSTELGFA
PYTDGSKSMI DVFCITGALM MGTAGLPHVI VRFFTVPKVK DARISAGWAL VFIGIMYTTV
PALSAFSRVN MIETINGADS QGVAYESAPQ WIKNWEKTGL IKWNDKNGDG KLYYAAGKME
DPASKNEMKI DNDIIVLATP EIANLPAWVI ALVAAGGLAA ALSTSAGLLL VISTSVSHDL
LKKNLMPNIS DKKELMFARL AAGVGIVIAG YFGVNPPGFV AAVVAFAFGL AASSLFPAII
MGIFSKTMNK EGAIAGMLTG LLFTASYIIY FKFVDPTGNV AANWFLGISP EGIGMVGMLV
NFGVAALVSR VTTATPLHVQ EMVESIRFPK GSGEASGH
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