Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2661 |
Symbol | |
ID | 5370880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3172601 |
End bp | 3174805 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830885 |
Product | peptidyl-dipeptidase Dcp |
Protein accession | YP_001366859 |
Protein GI | 153001178 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000935257 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGAC TAACCCTTAA ACCGCAAGCC CGCACGGCTA AGCTCACGCT AAGTGCCATC GCTTTAGCCT TAACTTTGGG CGCTTGTAGC ACACAGCAAC CCGAAGCCAG TGTTCAAGCA AACGCGGCGC CCAATGCCGT GTCAGCGCAG ATTATCAGTC AGAATGCGAC TAATCCATTC TTTAAACCCT ATGATACGTT TATGGAAATT CCGGCCTTTG ATAAGATCAA GCCAGAGCAT TTTCTCCCAG CCTTTAAAGC AGGCGTAGCT CAGCAACACG AACAAATTCA AGCGATTGTT GATAATAAAG CCAAACCCAC CTTCGCTAAT ACCATTGAAG CCATGGAATT TTCTGGCGAT CTAGTGACCC GCGTTTCTAA CGTCTTCTTT AACCTGACAG GCGCCGATAC TACGCCAGCA TTGCAAGCAC TCTCCAAAGA AGTGTCGCCT ATGCTATCGT CGGCAGAAGA CGATATCTTG CTCAATGACA AACTGTTTCA AAAAGTCAAA GCCGTTCACG ACGCGAAAGA CAGCCTAAAA CTCAGCACGG CCCAAGCCAA ATTGTTGGAA GATACCTATA AATCTTTCAC CCGTGGCGGC GCTAACTTAA GCGAACAAGA TAAAACCAAA CTGCGCGCAT TGAACGAAGA AATCGGTAAA CTCAATTTAG CCTTTGGTGA CAATCTATTA GCCGAAACCA ATGCCTTCGA ATTAGTGGTT GATAGCAAAG CCGATCTCGC AGGTTTACCC GCTGATGTGG TTGCAACCGC CTTTGAAACC GCGAAAAAAC GTGGCCATGA AGGCAAGTGG GTATTCACCA CTTCTCGCCC TTCTATCACG CCGTTTTTAA CCTATGCCGA TAACCGCCAG TTACGTGAAA AACTCTACAA AGGTTATATC GAGCGCGGTA ACAACAATAA CGCCAACGAT AACAAGATTA TCCTCGCGAA GATTGCCGCC CTGCGTGCTG AACGTGCTCA ACTGATGGGC TATAAAACCC ACGCGGATTT CGTGTTAGAA GAACGCACAG CTAAAACGCC AGAAAACGTC TATGGCTTAC TCAACAAAGT ATGGCCAGCG GCATTGGCCC AAGCCAAAAC CGAAGTGGCT GATATGCAAG CCATGATCGA CGCGCAAGGT GGCAAATTTA AGCTGCAAGC GTGGGACTGG GATTACTACG CCGACAAAAT TCGTGTCGCT AAGTACAGCT TTAACGAGCA ACAAACCCGC CCGTATTTCT CCCTCGACAG TACACTAAAA GGTGTGTTCT ACACGGCTAA CCGTTTGTAC GGTTTGACCT TTAAAGAACG TACCGACTTA CCCAAATACA ATGCAGAAGT CCGTACTTGG GAAGTTTACG ATAAAGACGG CAAGCTGATG GCCATCTTTA TGGGTGACTA TTTCACCCGC GACAGCAAAC GTGGCGGCGC TTGGATGAAT TCCTTCCGCA AACAATACAA TATGAATGGC GTTGATTCTA AACCTATTAT TGTTAACGTA TTGAACTACC CTCGCCCTGC GGGCAATGAG CCAGCGCTGC TGACCTTCGA TGAAGCCAGC ACCCTATTCC ACGAATTTGG CCACGCCCTA CACGGCATGT TATCGAACGT GGAATATCGC TCACAGGGTG GCACCGCCGT ACCTCGCGAT TACGTTGAGT TCCCATCGCA AGTGAATGAA AACTGGATGA CTCAGCCAGA AGTGTTAGCC CAATTTGCCA AGCACTACAA AACCGGCGAA GTGATCCCGC AAGAGCTAGT AAAGAAAATC CAAGCGGCCA GCAAGTTCAA CCAAGGCTTT GCCACCGTTG AATACATGGC GGCCACTAAG CTCGATTTAG ATTGGCACAC ATTAACCGAC ACCACGCCAA AGGATGCGGC CAAGTTTGAA GCAGACTCGT TAGCGGCAAT GGGACTGATT GAAGAAATTA GCCCACGCTA TCGCAGCACT TACTTCTCGC ATATTTTCGC GGGCGGTTAT TCAGCAGGCT ACTACAGCTA CCTGTGGTCG GATATTTTAG GCGCGGATGC TTTCGAAGCC TTTAAAGAAA ACGGCATTTT CGACAAGGCC ACTGCGGACT CCTTCCGTAA TAATATCCTG TCGAAAGGTG GCAGCGATGA TCCTATGCTG ATGTATAAAA ACTTCCGCGG TAAAGAAGCC GGCATAGAGC CGCTACTGCG TAGCCGCGGA TTACTGGCCG AGTAA
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Protein sequence | MKGLTLKPQA RTAKLTLSAI ALALTLGACS TQQPEASVQA NAAPNAVSAQ IISQNATNPF FKPYDTFMEI PAFDKIKPEH FLPAFKAGVA QQHEQIQAIV DNKAKPTFAN TIEAMEFSGD LVTRVSNVFF NLTGADTTPA LQALSKEVSP MLSSAEDDIL LNDKLFQKVK AVHDAKDSLK LSTAQAKLLE DTYKSFTRGG ANLSEQDKTK LRALNEEIGK LNLAFGDNLL AETNAFELVV DSKADLAGLP ADVVATAFET AKKRGHEGKW VFTTSRPSIT PFLTYADNRQ LREKLYKGYI ERGNNNNAND NKIILAKIAA LRAERAQLMG YKTHADFVLE ERTAKTPENV YGLLNKVWPA ALAQAKTEVA DMQAMIDAQG GKFKLQAWDW DYYADKIRVA KYSFNEQQTR PYFSLDSTLK GVFYTANRLY GLTFKERTDL PKYNAEVRTW EVYDKDGKLM AIFMGDYFTR DSKRGGAWMN SFRKQYNMNG VDSKPIIVNV LNYPRPAGNE PALLTFDEAS TLFHEFGHAL HGMLSNVEYR SQGGTAVPRD YVEFPSQVNE NWMTQPEVLA QFAKHYKTGE VIPQELVKKI QAASKFNQGF ATVEYMAATK LDLDWHTLTD TTPKDAAKFE ADSLAAMGLI EEISPRYRST YFSHIFAGGY SAGYYSYLWS DILGADAFEA FKENGIFDKA TADSFRNNIL SKGGSDDPML MYKNFRGKEA GIEPLLRSRG LLAE
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