Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2659 |
Symbol | |
ID | 5369756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3168540 |
End bp | 3170186 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640830883 |
Product | ATP-dependent OLD family endonuclease |
Protein accession | YP_001366857 |
Protein GI | 153001176 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0191795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTTA TCTGTGAACA CCAAACCTTG TTTACAAAAC ACGAGACAAA GTTCGATCAA CTTGATATTC CTCAAGTAGG CTCTGGCAAC TTCAAGTTTT CAATTGCTGC GTCAAAGAAA AGTATAAAAG CACTAAGTAA CAGTCTTGTA AAGCGAACAG ATTACCAAGG GCAGGAAGTA CAATTTGAGT GGCTTTTTAG TACACCACTT TTTGAGCATA TAGGACAAGG TGAAGATGTT CTTACTTGGT TTAATTTTGA CTATCGCAGT GGTCAAATCC ACGAACCACT GGATAAACAA TGTGCCCTTA ACCTAGAAGT ACCAAGTGGA TTCAGTTGGA AGGAACTTAA CATTTCTCTA AATAATGGTT ACTACTCAAC TGATAAGGAT AATATTACAG ATGTTTTAAA TGCCATTTCA GTGACGAAGC CTAGGGTAAA TATTAGCCCT GTATTTATAC CTGCAATTCG TCAGATTGGA TCTTCAGACT CGCAGCTGTC AAAGCAATCA GACTTTAGTG GCTCTGGTAT TATTGAGCGT CTCCAAAAAC TCGAACGCCC AGCAATTGGT TCAAACCAAG AAGATAAAAA AAAGTTTGAG AAGATAAATG CGTTTTTACG CGGTGTGTTA GAGAATGAAA GCGCTACTTT AGAAATACCA CATGATCGCT CAATGATCAT CGCTCATATG GATGGCAAAA CTCTCCCATT GGAGTCTTTA GGTACTGGTA TTCATGAGGT AGTTATCTTA GCTGCCGCCG CAACACTTCT TGAAAATACT GTGGTGTGTA TAGAGGAACC AGAGCTTCAT TTACACCCAA TCCTTCAGCG TAAACTCATT AGTTATCTGA ATACTGATAC CAGCAATCAG TACTTTATTA CAACACATTC TGCACACCTT CTTGATGCTA CAGAGGCACA AATTTTCCAT GTGTCGATGG AAGATGGCGT ATCAAAAGCC ACAACTGTAT TTAATACACG TGAGCGTTCT GAACTATGCG CAAGTCTTGG TTACAAAGGG TCGGATATTC TCCAAGCCAA CTGCATCATT TGGGTTGAAG GTCCATCCGA CAGAACCTAC TTAAACTATT GGCTTAAAGC TAAGGATGAA ACTCTAATTG AAGGAATACA CTACTCTATA ATGTTTTACG GTGGTCGCCT AGCTAGTCAT ATCAGTGGCT ATGACACAGA TGAACTGGAA GAGCATGAAA AAGAGCTTAT CTCACTACGA AAATTAAATC GTAACAGTGT GATCATGATA GACAGCGATA AAGCAACACC TAAAAGTCGC ATCAATAATA CAAAGAAGCG CCTACAAGAT GAATTCAACA AAGGCCCCGG ATTTGCTTGG GTAACAGAAG GCCGTGAAGT CGAAAACTAT TTAGATGAGG ATAAGGTAGA GAAAGCTGTA ATTGCCGTTC ATCCTAAATC AGCGATTGGG CTACGTGCAA AGGGAAAGTG GGAAAACCTT CTTGAATTCA TACATAAAAC CACCTCCAAT AATAAAGATA AACCCTCCCC TACAGCTAGC AAGGTAAAAG TAGCAAACTA CTACACCAAC TACTACCCAG CTGAATTAAC CAAGCTAGAT TTAAATAAAA ATATTAACCA GTTGGTCATG TTCATTAAAA AGTCTAATAA TATTTAA
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Protein sequence | MRLICEHQTL FTKHETKFDQ LDIPQVGSGN FKFSIAASKK SIKALSNSLV KRTDYQGQEV QFEWLFSTPL FEHIGQGEDV LTWFNFDYRS GQIHEPLDKQ CALNLEVPSG FSWKELNISL NNGYYSTDKD NITDVLNAIS VTKPRVNISP VFIPAIRQIG SSDSQLSKQS DFSGSGIIER LQKLERPAIG SNQEDKKKFE KINAFLRGVL ENESATLEIP HDRSMIIAHM DGKTLPLESL GTGIHEVVIL AAAATLLENT VVCIEEPELH LHPILQRKLI SYLNTDTSNQ YFITTHSAHL LDATEAQIFH VSMEDGVSKA TTVFNTRERS ELCASLGYKG SDILQANCII WVEGPSDRTY LNYWLKAKDE TLIEGIHYSI MFYGGRLASH ISGYDTDELE EHEKELISLR KLNRNSVIMI DSDKATPKSR INNTKKRLQD EFNKGPGFAW VTEGREVENY LDEDKVEKAV IAVHPKSAIG LRAKGKWENL LEFIHKTTSN NKDKPSPTAS KVKVANYYTN YYPAELTKLD LNKNINQLVM FIKKSNNI
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