| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2640 |
|---|
| Symbol | |
|---|
| ID | 5373011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3147626 |
|---|
| End bp | 3148672 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640830864 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366838 |
|---|
| Protein GI | 153001157 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCAA ATTCCCCCGT CGATATTTTT GCCTTTGCTG GTCGAGAAAT ATTTCTAAAA
CGTGATGATT TATTGCATCC AGCGTTTAGC GGCAATAAAT CGCGTAAATT CGGCTACTTT
TTAGATCATG AGTTTGCAGG CATCAACAAG GTGATAGGCC ACGGCTCACC CTTAGCGAAC
TCTTTGTATT CCCTATCAAC ATTGGCCAAG ATGAAAGGCT GGCAGTGTGA TTTTTATGTT
GACCATATTG CCAGTCAAAT AGTCAAGCAT CCCACGGGGA ATTACGCTGC GGCATTGGCA
AATGGCGCCA ATATTATCGA CTTAAGTGAG TTAATGGCGC AAAAGCAGAC GTTTACTCAG
TCGCAATGTG AACCTCAGGT TTTGTTAGAG ATTAATGCTA GATCTGAGCC TGCTTTGCAA
ACGGGTAGTG CGCGACTGAG TTGCCAAGAG TATATCGAGA CTCAGGTACT CGCGAATGAG
CCGACGGCGC TTTTTATCCC AGAGGGCGGG CGTTGTTCCT ACGCTGAATA CGGGGTAAAT
GTATTAGCGC AAGAAATAGT GCAATTTGCG CAGGCGAATG ATTTAGTCGA TTTAACGGTA
TTTTTACCGT CGGGGACGGG GACGACGGCG TTATTTTTAA ATCAGTACTT TATTCGTCAA
CAAACGGCGA TTCGCGTTGT GACTTGCGCT GTGGTGGGCG GCGATGATTA TTTACGTTTG
CAATTCTCTA TGCTTAATCC AAATACTCTC GAGCATCCAC AGATAGTGAA TGTCGGCAAA
AAATATCACT TTGGTAAACT TTACCCTGAA TTTTATGCCA TGTGGCAGCG TGTTTGTGCC
TCAGGGATTC AGTTTGAATT ACTCTACGAT CCCTTAGGTT TTATTGTGCT TGAGGATTAT
TTACAGCGTA GTGAATTAGG TCATGTGATG TATCTGCATC AAGGCGGAAT ATTAGGGAAT
GAGACCATGT TGCCGCGTTA TCAGCGTAAA TTTGCTGGGA CATGGGACTT TTCAAAGAAT
AGTAATATAA CCAGCGCAAT AGATTAA
|
|---|
| Protein sequence | MFANSPVDIF AFAGREIFLK RDDLLHPAFS GNKSRKFGYF LDHEFAGINK VIGHGSPLAN
SLYSLSTLAK MKGWQCDFYV DHIASQIVKH PTGNYAAALA NGANIIDLSE LMAQKQTFTQ
SQCEPQVLLE INARSEPALQ TGSARLSCQE YIETQVLANE PTALFIPEGG RCSYAEYGVN
VLAQEIVQFA QANDLVDLTV FLPSGTGTTA LFLNQYFIRQ QTAIRVVTCA VVGGDDYLRL
QFSMLNPNTL EHPQIVNVGK KYHFGKLYPE FYAMWQRVCA SGIQFELLYD PLGFIVLEDY
LQRSELGHVM YLHQGGILGN ETMLPRYQRK FAGTWDFSKN SNITSAID
|
|---|
| |