| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2633 |
|---|
| Symbol | |
|---|
| ID | 5371661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3142017 |
|---|
| End bp | 3142961 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640830857 |
|---|
| Product | putative CheW protein |
|---|
| Protein accession | YP_001366831 |
|---|
| Protein GI | 153001150 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0317026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACG TACTTGCAAC CGTAGATCAG CGTACCAAAC TCGTGGGTGA GAACCGCCTC
GAGTTGTTGC TCTTTAGCAT TAATTCCACG CAGTTATTTG CCATCAACGT CTTTAAAGTC
AAAGAAGTGG TTAAGCTTCC TCCCCTTAAT GCCATGCCTG GGAGTCATCC TCATATTTAT
GGTGTTGCTA ATATTCGCGG CATTTCTATC CCTGTGATCG ATTTACGTTC GGCTATTGGG
TTTAAACCTG TGCCGCCAGA TGATGATGCT AATATGATCA TCACAGAATA TAACCGCAGC
GTGCAGGGCT TCTTAGTCGG CAAGGTTGAG CACATTATCA ACATGACATG GAGCGATATC
ATGCCGCCGC CGAAAACGGC GGGGCGCAAT AATTATCTGA CGGCAATTAC CCGCATCGAA
CATCAAGGCA AATCGCAATT AGTGTCGATT ATCGACGTAG AGAAAGTACT GGCGGAGATC
ATTCACTACG ATATTAGTTT ATCTGAAGGT GTGCTCGATG AAACCTTAGT CCATGAAATG
CCAGGCAGAA AAATCTTGAT TGTGGACGAT TCATCGACCG CAAGGCGTCA GGTGCGTGAG
ACTTTAAGCC AACTAGGCAT AGAAATCATT GAGGCTTCTG ATGGCTTGCA GGCGCTAACG
TTATTGCAAA AATGGCGTGA TGAAGGCAAG CAAGTGTCCA AAGAATTACT GATGATGATT
ACTGATGCCG AAATGCCCGA GATGGACGGC TACAAACTGA CCTCTGAAGT CCGCGGTGAT
AAAGCTATGT CAGATCTATA TATTACCTTG AATACTTCAC TGAGCGGCAG CTTTAACCAT
GCCATGGTTG AAAAGGTGGG CTGTGATAAG TTTATTTCTA AGTTCCAGCC GGATCTGCTG
GTGGAAGTGG TACAAGAAAG ATTAAGACAA GTGATTAATC ACTAA
|
|---|
| Protein sequence | MANVLATVDQ RTKLVGENRL ELLLFSINST QLFAINVFKV KEVVKLPPLN AMPGSHPHIY
GVANIRGISI PVIDLRSAIG FKPVPPDDDA NMIITEYNRS VQGFLVGKVE HIINMTWSDI
MPPPKTAGRN NYLTAITRIE HQGKSQLVSI IDVEKVLAEI IHYDISLSEG VLDETLVHEM
PGRKILIVDD SSTARRQVRE TLSQLGIEII EASDGLQALT LLQKWRDEGK QVSKELLMMI
TDAEMPEMDG YKLTSEVRGD KAMSDLYITL NTSLSGSFNH AMVEKVGCDK FISKFQPDLL
VEVVQERLRQ VINH
|
|---|
| |